4.7 Article

Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins

Related references

Note: Only part of the references are listed.
Review Pharmacology & Pharmacy

Cryptic prophages as targets for drug development

Xiaoxue Wang et al.

DRUG RESISTANCE UPDATES (2016)

Article Multidisciplinary Sciences

Comparative analysis of prophage-like elements in Helicobacter sp genomes

Xiangyu Fan et al.

PEERJ (2016)

Review Microbiology

A new perspective on lysogeny: prophages as active regulatory switches of bacteria

Ron Feiner et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

Dormant phages of Helicobacter pylori reveal distinct populations in Europe

F. F. Vale et al.

SCIENTIFIC REPORTS (2015)

Article Multidisciplinary Sciences

Pervasive domestication of defective prophages by bacteria

Louis-Marie Bobay et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Genetics & Heredity

Methylome Diversification through Changes in DNA Methyltransferase Sequence Specificity

Yoshikazu Furuta et al.

PLOS GENETICS (2014)

Review Microbiology

The role of variable DNA tandem repeats in bacterial adaptation

Kai Zhou et al.

FEMS MICROBIOLOGY REVIEWS (2014)

Article Biotechnology & Applied Microbiology

Characterization of Helicobacter pylori Bacteriophage KHP30

Jumpei Uchiyama et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Biochemical Research Methods

Using Tablet for visual exploration of second-generation sequencing data

Iain Milne et al.

BRIEFINGS IN BIOINFORMATICS (2013)

Review Biotechnology & Applied Microbiology

Coevolution of bacteria and their viruses

Frantisek Golais et al.

FOLIA MICROBIOLOGICA (2013)

Article Biotechnology & Applied Microbiology

Proteome variability among Helicobacter pylori isolates clustered according to genomic methylation

I. Vitoriano et al.

JOURNAL OF APPLIED MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

The Adaptation of Temperate Bacteriophages to Their Host Genomes

Louis-Marie Bobay et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Multidisciplinary Sciences

Temperate Bacterial Viruses as Double-Edged Swords in Bacterial Warfare

Joao Alves Gama et al.

PLOS ONE (2013)

Article Immunology

Importance of prophages to evolution and virulence of bacterial pathogens

Louis-Charles Fortier et al.

VIRULENCE (2013)

Article Evolutionary Biology

Genome-Wide Survey of Mutual Homologous Recombination in a Highly Sexual Bacterial Species

Koji Yahara et al.

GENOME BIOLOGY AND EVOLUTION (2012)

Article Biochemistry & Molecular Biology

Primer3-new capabilities and interfaces

Andreas Untergasser et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biotechnology & Applied Microbiology

Extracellular DNA in Helicobacter pylori biofilm: a backstairs rumour

R. Grande et al.

JOURNAL OF APPLIED MICROBIOLOGY (2011)

Article Biochemistry & Molecular Biology

PHAST: A Fast Phage Search Tool

You Zhou et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biotechnology & Applied Microbiology

The Distribution of a Phage-Related Insertion Sequence Element in the Cyanobacterium, Microcystis aeruginosa

Sotaro Kuno et al.

MICROBES AND ENVIRONMENTS (2010)

Article Multidisciplinary Sciences

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

Cryptic prophages help bacteria cope with adverse environments

Xiaoxue Wang et al.

NATURE COMMUNICATIONS (2010)

Article Gastroenterology & Hepatology

Disease association with two Helicobacter pylori duplicate outer membrane protein genes, homB and homA

Monica Oleastro et al.

GUT PATHOGENS (2009)

Article Biotechnology & Applied Microbiology

The RAST server: Rapid annotations using subsystems technology

Ramy K. Aziz et al.

BMC GENOMICS (2008)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Editorial Material Materials Science, Multidisciplinary

Helicobacter pylori Phage Screening

Filipa F. Vale et al.

MICROSCOPY AND MICROANALYSIS (2008)

Article Biochemical Research Methods

A new algorithm for cluster analysis of genomic methylation:: the Helicobacter pylori case

F. F. Vale et al.

BIOINFORMATICS (2008)

Article Biochemistry & Molecular Biology

Inference of population structure using multilocus genotype data: dominant markers and null alleles

Daniel Falush et al.

MOLECULAR ECOLOGY NOTES (2007)

Article Biochemistry & Molecular Biology

TRDB - The Tandem Repeats Database

Yevgeniy Gelfand et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Evolution of Chlamydia trachomatis diversity occurs by widespread interstrain recombination involving hotspots

Joao P. Gomes et al.

GENOME RESEARCH (2007)

Review Biophysics

Natural history of S-adenosylmethionine-binding proteins -: art. no. 19

PZ Kozbial et al.

BMC STRUCTURAL BIOLOGY (2005)

Article Microbiology

Effect of phage infection on toxin production by Clostridium difficile

S Goh et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2005)

Review Microbiology

Phages and the evolution of bacterial pathogens:: From genomic rearrangements to lysogenic conversion

H Brüssow et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2004)

Article Microbiology

Evolutionary dynamics of insertion sequences in Helicobacter pylori

A Kalia et al.

JOURNAL OF BACTERIOLOGY (2004)

Review Microbiology

Prophage genomics

C Canchaya et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2003)

Article Multidisciplinary Sciences

Traces of human migrations in Helicobacter pylori populations

D Falush et al.

SCIENCE (2003)

Article Multidisciplinary Sciences

Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori

B Björkholm et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)