4.7 Article

A Genome-wide Study of Non-3UTR Polyadenylation Sites in Arabidopsis thaliana

Related references

Note: Only part of the references are listed.
Editorial Material Cell Biology

RNA METABOLISM Promoters drive alternative polyadenylation

Eytan Zlotorynski

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)

Editorial Material Biochemistry & Molecular Biology

Polyadenylation in E. coli: a 20 year odyssey

Sidney R. Kushner

Article Biochemical Research Methods

Genome-wide identification and predictive modeling of polyadenylation sites in eukaryotes

Guoli Ji et al.

BRIEFINGS IN BIOINFORMATICS (2015)

Article Biotechnology & Applied Microbiology

Overlapping genes: a window on gene evolvability

Maxime Huvet et al.

BMC GENOMICS (2014)

Review Biochemistry & Molecular Biology

Diversity and evolution of transposable elements in Arabidopsis

Zoe Joly-Lopez et al.

CHROMOSOME RESEARCH (2014)

Article Biochemistry & Molecular Biology

Functional Consequences of Splicing of the Antisense Transcript COOLAIR on FLC Transcription

Sebastian Marquardt et al.

MOLECULAR CELL (2014)

Editorial Material Multidisciplinary Sciences

Role of alternative polyadenylation in epigenetic silencing and antisilencing

Liuyin Ma et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Cell Biology

Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors

Andreas R. Gruber et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2014)

Article Multidisciplinary Sciences

Species-specific factors mediate extensive heterogeneity of mRNA 3′ ends in yeasts

Zarmik Moqtaderi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Review Biochemistry & Molecular Biology

Alternative cleavage and polyadenylation: the long and short of it

Bin Tian et al.

TRENDS IN BIOCHEMICAL SCIENCES (2013)

Article Biotechnology & Applied Microbiology

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants

Arthur G. Hunt et al.

BMC GENOMICS (2012)

Article Biochemistry & Molecular Biology

U1 snRNP Determines mRNA Length and Regulates Isoform Expression

Michael G. Berg et al.

Article Biotechnology & Applied Microbiology

A unified framework of overlapping genes: Towards the origination and endogenic regulation

Meng-Ru Ho et al.

GENOMICS (2012)

Article Biochemistry & Molecular Biology

Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation

Alexander Sherstnev et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

Philippe Lamesch et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Genome-Wide Control of Polyadenylation Site Choice by CPSF30 in Arabidopsis

Patrick E. Thomas et al.

PLANT CELL (2012)

Review Genetics & Heredity

Flowering time control: another window to the connection between antisense RNA and chromatin

Robert Ietswaart et al.

TRENDS IN GENETICS (2012)

Review Plant Sciences

RNA regulatory elements and polyadenylation in plants

Arthur G. Hunt

FRONTIERS IN PLANT SCIENCE (2012)

Review Cell Biology

Ending the message: poly(A) signals then and now

Nick J. Proudfoot

GENES & DEVELOPMENT (2011)

Review Biochemistry & Molecular Biology

Mechanisms and Consequences of Alternative Polyadenylation

Dafne Campigli Di Giammartino et al.

MOLECULAR CELL (2011)

Article Multidisciplinary Sciences

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation

Xiaohui Wu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Review Cell Biology

Alternative polyadenylation and gene expression regulation in plants

Denghui Xing et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2011)

Article Biochemical Research Methods

Fast and SNP-tolerant detection of complex variants and splicing in short reads

Thomas D. Wu et al.

BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

Daisuke Kaida et al.

NATURE (2010)

Article Multidisciplinary Sciences

Direct RNA sequencing

Fatih Ozsolak et al.

NATURE (2009)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Article Biochemical Research Methods

Predictive modeling of plant messenger RNA polyadenylation sites

Guoli Ji et al.

BMC BIOINFORMATICS (2007)

Article Biotechnology & Applied Microbiology

Effect of 5′UTR introns on gene expression in Arabidopsis thaliana

Betty Y. W. Chung et al.

BMC GENOMICS (2006)

Article Biochemistry & Molecular Biology

Features of Arabidopsis genes and genome discovered using full-length cDNAs

NN Alexandrov et al.

PLANT MOLECULAR BIOLOGY (2006)

Article Biochemical Research Methods

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

TD Wu et al.

BIOINFORMATICS (2005)

Article Multidisciplinary Sciences

Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

V Stolc et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Review Cell Biology

Nonsense-mediated mRNA decay: terminating erroneous gene expression

KE Baker et al.

CURRENT OPINION IN CELL BIOLOGY (2004)

Article Multidisciplinary Sciences

Empirical analysis of transcriptional activity in the Arabidopsis genome

K Yamada et al.

SCIENCE (2003)