Related references
Note: Only part of the references are listed.Adaptation of intertidal biofilm communities is driven by metal ion and oxidative stresses
Weipeng Zhang et al.
SCIENTIFIC REPORTS (2013)
The effect of substratum type, orientation and depth on the development of bacterial deep-sea biofilm communities grown on artificial substrata deployed in the Eastern Mediterranean
Nikoleta Bellou et al.
BIOFOULING (2012)
Unraveling assembly of stream biofilm communities
Katharina Besemer et al.
ISME JOURNAL (2012)
First discovery of a cold seep on the continental margin of the central Red Sea
Zenon B. Batang et al.
JOURNAL OF MARINE SYSTEMS (2012)
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas et al.
GENOME RESEARCH (2011)
PyNAST: a flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso et al.
BIOINFORMATICS (2010)
Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments
Beth N. Orcutt et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2010)
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
Jens Reeder et al.
NATURE METHODS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Inter- and Intraspecific Variations of Bacterial Communities Associated with Marine Sponges from San Juan Island, Washington
On On Lee et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
BARCRAWL and BARTAB: software tools for the design and implementation of barcoded primers for highly multiplexed DNA sequencing
Daniel N. Frank
BMC BIOINFORMATICS (2009)
Microbial methane oxidation and sulfate reduction at cold seeps of the deep Eastern Mediterranean Sea
Enoma O. Omoregie et al.
MARINE GEOLOGY (2009)
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
J. R. Cole et al.
NUCLEIC ACIDS RESEARCH (2009)
Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies
Yong Wang et al.
PLOS ONE (2009)
Endosymbioses between bacteria and deep-sea siboglinid tubeworms from an Arctic Cold Seep (Haakon Mosby Mud Volcano, Barents Sea)
Tina Loesekann et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
Microbial response to salinity change in Lake Chaka, a hypersaline lake on Tibetan plateau
Hongchen Jiang et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Global patterns in bacterial diversity
Catherine A. Lozupone et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Bacterial community structure of biofilms on artificial surfaces in an estuary
Paul R. Jones et al.
MICROBIAL ECOLOGY (2007)
Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia : Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes
Sebastien Duperron et al.
FEMS MICROBIOLOGY ECOLOGY (2007)
DsrB gene-based DGGE for community and diversity surveys of sulfate-reducing bacteria
Joke Geets et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2006)
Occurrence, phylogeny and evolution of ribulose-1,5-bisphosphate carboxylase/oxygenase genes in obligately chemolithoautotrophic sulfur-oxidizing bacteria of the genera Thiomicrospira and Thioalkalimicrobium
Tatjana P. Tourova et al.
MICROBIOLOGY-SGM (2006)
Vertical distribution and diversity of bacteria and archaea in sulfide and methane-rich cold seep sediments located at the base of the Florida Escarpment
Andrew J. Reed et al.
EXTREMOPHILES (2006)
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Dual symbiosis in a Bathymodiolus sp mussel from a methane seep on the gabon continental margin (southeast Atlantic):: 16S rRNA phylogeny and distribution of the symbionts in gills
S Duperron et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Diversity and distribution of methanotrophic archaea at cold seeps
K Knittel et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Bacterial biofilms: From the natural environment to infectious diseases
L Hall-Stoodley et al.
NATURE REVIEWS MICROBIOLOGY (2004)
Identification of members of the metabolically active microbial populations associated with Beggiatoa species mat communities form Gulf of Mexico cold-seep sediments
HJ Mills et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Open source clustering software
MJL de Hoon et al.
BIOINFORMATICS (2004)
16S rDNA-based phylogeny of sulphur-oxidising bacterial endosymbionts in marine bivalves from cold-seep habitats
JF Imhoff et al.
MARINE ECOLOGY PROGRESS SERIES (2003)
The biofilm matrix - an immobilized but dynamic microbial environment
IW Sutherland
TRENDS IN MICROBIOLOGY (2001)
Dual symbiosis in the cold-seep thyasirid clam Maorithyas hadalis from the hadal zone in the Japan Trench, western Pacific
Y Fujiwara et al.
MARINE ECOLOGY PROGRESS SERIES (2001)
A marine microbial consortium apparently mediating anaerobic oxidation of methane
A Boetius et al.
NATURE (2000)
Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes
HY Dang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)