4.8 Article

Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses

Related references

Note: Only part of the references are listed.
Article Microbiology

Orthologous Gene Clusters and Taxon Signature Genes for Viruses of Prokaryotes

David M. Kristensen et al.

JOURNAL OF BACTERIOLOGY (2013)

Review Biochemistry & Molecular Biology

Mechanisms for RNA Capture by ssDNA Viruses: Grand Theft RNA

Kenneth Stedman

JOURNAL OF MOLECULAR EVOLUTION (2013)

Article Multidisciplinary Sciences

Molecular and microscopic evidence of viruses in marine copepods

Darren S. Dunlap et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Multidisciplinary Sciences

Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes

Sebastien Santini et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Virology

A virocentric perspective on the evolution of life

Eugene V. Koonin et al.

CURRENT OPINION IN VIROLOGY (2013)

Article Biochemistry & Molecular Biology

Nucleic acid packaging in viruses

Jeffrey A. Speir et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2012)

Article Microbiology

Phylogenomics of T4 cyanophages: lateral gene transfer in the 'core' and origins of host genes

J. Cesar Ignacio-Espinoza et al.

ENVIRONMENTAL MICROBIOLOGY (2012)

Article Biotechnology & Applied Microbiology

Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta)

Karyna Rosario et al.

JOURNAL OF GENERAL VIROLOGY (2012)

Article Biochemistry & Molecular Biology

Related haloarchaeal pleomorphic viruses contain different genome types

Ana Sencilo et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Metagenomes of the Picoalga Bathycoccus from the Chile Coastal Upwelling

Daniel Vaulot et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Provirophages and transpovirons as the diverse mobilome of giant viruses

Christelle Desnues et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Archaeal virus with exceptional virion architecture and the largest single-stranded DNA genome

Tomohiro Mochizuki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Evolutionary Biology

Widespread Horizontal Gene Transfer from Circular Single-stranded DNA Viruses to Eukaryotic Genomes

Huiquan Liu et al.

BMC EVOLUTIONARY BIOLOGY (2011)

Article Biotechnology & Applied Microbiology

High-throughput sequencing of Astrammina rara: Sampling the giant genome of a giant foraminiferan protist

Andrea Habura et al.

BMC GENOMICS (2011)

Article Biochemistry & Molecular Biology

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Review Microbiology

Genomics of Bacterial and Archaeal Viruses: Dynamics within the Prokaryotic Virosphere

Mart Krupovic et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2011)

Article Biochemistry & Molecular Biology

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

Ivica Letunic et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Virology

The nucleotide sequence and genome organization of Plasmopara halstedii virus

Marion Heller-Dohmen et al.

VIROLOGY JOURNAL (2011)

Review Virology

Recombination in Eukaryotic Single Stranded DNA Viruses

Darren P. Martin et al.

VIRUSES-BASEL (2011)

Article Virology

Common origins and host-dependent diversity of plant and animal viromes

Valerian V. Dolja et al.

CURRENT OPINION IN VIROLOGY (2011)

Article Biochemical Research Methods

Search and clustering orders of magnitude faster than BLAST

Robert C. Edgar

BIOINFORMATICS (2010)

Editorial Material Virology

Order to the Viral Universe

Mart Krupovic et al.

JOURNAL OF VIROLOGY (2010)

Article Multidisciplinary Sciences

FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments

Morgan N. Price et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

A geminivirus-related DNA mycovirus that confers hypovirulence to a plant pathogenic fungus

Xiao Yu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Evolutionary Biology

Geminiviruses: a tale of a plasmid becoming a virus

Mart Krupovic et al.

BMC EVOLUTIONARY BIOLOGY (2009)

Review Microbiology

Classification of Myoviridae bacteriophages using protein sequence similarity

Rob Lavigne et al.

BMC MICROBIOLOGY (2009)

Article Microbiology

Metagenomic analysis of viruses in reclaimed water

Karyna Rosario et al.

ENVIRONMENTAL MICROBIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Diverse circovirus-like genome architectures revealed by environmental metagenomics

Karyna Rosario et al.

JOURNAL OF GENERAL VIROLOGY (2009)

Article Biochemistry & Molecular Biology

An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope

Maija K. Pietila et al.

MOLECULAR MICROBIOLOGY (2009)

Letter Microbiology

The complexity of the virus world

Eugene V. Koonin et al.

NATURE REVIEWS MICROBIOLOGY (2009)

Article Multidisciplinary Sciences

Metagenomic Analysis of RNA Viruses in a Fresh Water Lake

Appolinaire Djikeng et al.

PLOS ONE (2009)

Article Mathematical & Computational Biology

A comparative analysis of the structural architecture of ssDNA viruses

Antonette Bennett et al.

COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE (2008)

Review Genetics & Heredity

Rates of evolutionary change in viruses: patterns and determinants

Siobain Duffy et al.

NATURE REVIEWS GENETICS (2008)

Article Microbiology

New bacteriophages that infect the phytopathogen Ralstonia solanacearum

Takashi Yamada et al.

MICROBIOLOGY-SGM (2007)

Article Biochemistry & Molecular Biology

ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins

Markus Wiederstein et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

The marine viromes of four oceanic regions

Florent E. Angly et al.

PLOS BIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Previously unknown virus infects marine diatom

K Nagasaki et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Microbiology

Parasites and phytoplankton, with special emphasis on dinoflagellate infections

MG Park et al.

JOURNAL OF EUKARYOTIC MICROBIOLOGY (2004)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Chemistry, Multidisciplinary

UCSF chimera - A visualization system for exploratory research and analysis

EF Pettersen et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)

Review Microbiology

Imbroglios of viral taxonomy: Genetic exchange and failings of phenetic approaches

JG Lawrence et al.

JOURNAL OF BACTERIOLOGY (2002)

Article Evolutionary Biology

An approximately unbiased test of phylogenetic tree selection

H Shimodaira

SYSTEMATIC BIOLOGY (2002)

Article Microbiology

Molecular identification of algal endosymbionts in large miliolid foraminifera: 1. Chlorophytes

J Pawlowski et al.

JOURNAL OF EUKARYOTIC MICROBIOLOGY (2001)