4.2 Review

Polyuridylation in Eukaryotes: A 3′-End Modification Regulating RNA Life

Related references

Note: Only part of the references are listed.
Article Chemistry, Multidisciplinary

Detection of 3′-End RNA Uridylation with a Protein Nanopore

Massimiliano Clamer et al.

ACS NANO (2014)

Article Biochemistry & Molecular Biology

Uridylation by TUT4 and TUT7 Marks mRNA for Degradation

Jaechul Lim et al.

Article Biochemistry & Molecular Biology

TAIL-seq: Genome-wide Determination of Poly(A) Tail Length and 3′ End Modifications

Hyeshik Chang et al.

MOLECULAR CELL (2014)

Article Multidisciplinary Sciences

Methylation protects microRNAs from an AGO1-associated activity that uridylates 5' RNA fragments generated by AGO1 cleavage

Guodong Ren et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biochemistry & Molecular Biology

The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway

Michal Malecki et al.

EMBO JOURNAL (2013)

Article Multidisciplinary Sciences

A role for the Perlman syndrome exonuclease Dis3l2 in the Lin28-let-7 pathway

Hao-Ming Chang et al.

NATURE (2013)

Article Biochemistry & Molecular Biology

Eri1 degrades the stem-loop of oligouridylated histone mRNAs to induce replication-dependent decay

Kai P. Hoefig et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Uridylation prevents 3' trimming of oligoadenylated mRNAs

Francois Michael Sement et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemistry & Molecular Biology

Uridylation of miRNAs by HEN1 SUPPRESSOR1 in Arabidopsis

Guodong Ren et al.

CURRENT BIOLOGY (2012)

Article Biochemistry & Molecular Biology

The Arabidopsis Nucleotidyl Transferase HESO1 Uridylates Unmethylated Small RNAs to Trigger Their Degradation

Yuanyuan Zhao et al.

CURRENT BIOLOGY (2012)

Review Genetics & Heredity

Regulation of cytoplasmic mRNA decay

Daniel R. Schoenberg et al.

NATURE REVIEWS GENETICS (2012)

Article Biochemistry & Molecular Biology

Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28

Fionna E. Loughlin et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Widespread RNA 3′-end oligouridylation in mammals

Yun S. Choi et al.

Article Biochemistry & Molecular Biology

Functional Implications from the Cid1 Poly(U) Polymerase Crystal Structure

Paola Munoz-Tello et al.

STRUCTURE (2012)

Article Multidisciplinary Sciences

Trim71 cooperates with microRNAs to repress Cdkn1a expression and promote embryonic stem cell proliferation

Hao-Ming Chang et al.

NATURE COMMUNICATIONS (2012)

Article Biochemistry & Molecular Biology

Molecular Basis for Interaction of let-7 MicroRNAs with Lin28

Yunsun Nam et al.

Article Biochemistry & Molecular Biology

Lin28A and Lin28B Inhibit let-7 MicroRNA Biogenesis by Distinct Mechanisms

Elena Piskounova et al.

Article Biochemistry & Molecular Biology

The human cytoplasmic RNA terminal U-transferase ZCCHC11 targets histone mRNAs for degradation

Marie-Joelle Schmidt et al.

Article Biochemistry & Molecular Biology

Deep sequencing of microRNA precursors reveals extensive 3′ end modification

Martin A. Newman et al.

Review Cell Biology

Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transfer

Ruslan Aphasizhev et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2011)

Article Biochemistry & Molecular Biology

RNA turnover in human mitochondria: More questions than answers?

Lukasz S. Borowski et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2010)

Article Biochemistry & Molecular Biology

Hen1 is required for oocyte development and piRNA stability in zebrafish

Leonie M. Kamminga et al.

EMBO JOURNAL (2010)

Article Biochemistry & Molecular Biology

RET1-Catalyzed Uridylylation Shapes the Mitochondrial Transcriptome in Trypanosoma brucei

Inna Aphasizheva et al.

MOLECULAR AND CELLULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance

Roman J. Szczesny et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Uridylation of mature miRNAs and siRNAs by the MUT68 nucleotidyltransferase promotes their degradation in Chlamydomonas

Fadia Ibrahim et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Target RNA-Directed Trimming and Tailing of Small Silencing RNAs

Stefan L. Ameres et al.

SCIENCE (2010)

Article Biochemistry & Molecular Biology

The Argonaute CSR-1 and Its 22G-RNA Cofactors Are Required for Holocentric Chromosome Segregation

Julie M. Claycomb et al.

Article Biochemistry & Molecular Biology

CDE-1 Affects Chromosome Segregation through Uridylation of CSR-1-Bound siRNAs

Josien C. van Wolfswinkel et al.

Article Biochemistry & Molecular Biology

Distinct Argonaute-Mediated 22G-RNA Pathways Direct Genome Surveillance in the C. elegans Germline

Weifeng Gu et al.

MOLECULAR CELL (2009)

Article Cell Biology

Zcchc11-dependent uridylation of microRNA directs cytokine expression

Matthew R. Jones et al.

NATURE CELL BIOLOGY (2009)

Article Genetics & Heredity

Lin28 promotes transformation and is associated with advanced human malignancies

Srinivas R. Viswanathan et al.

NATURE GENETICS (2009)

Article Biochemistry & Molecular Biology

Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover

Olivia S. Rissland et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells

John P. Hagan et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans

Nicolas J. Lehrbach et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

2′-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena

Henriette M. Kurth et al.

Review Biochemistry & Molecular Biology

Terminal RNA uridylyltransferases of trypanosomes

Ruslan Aphasizhev et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2008)

Article Biochemistry & Molecular Biology

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

Ryan D. Morin et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

Guide RNA-Binding Complex from Mitochondria of Trypanosomatids

James Weng et al.

MOLECULAR CELL (2008)

Article Multidisciplinary Sciences

Induced pluripotent stem cell lines derived from human somatic cells

Junying Yu et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

3′ Terminal oligo U-tract-mediated stimulation of decapping

Man-Gen Song et al.

Review Biochemistry & Molecular Biology

RNA quality control in eukaryotes

Meenakshi K. Doma et al.

Review Biochemistry & Molecular Biology

RNA-specific ribonucleotidyl transferases

Georges Martin et al.

Article Biochemistry & Molecular Biology

The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC

Michael D. Horwich et al.

CURRENT BIOLOGY (2007)

Article Biochemistry & Molecular Biology

A mammalian microRNA expression atlas based on small RNA library sequencing

Pablo Landgraf et al.

Article Biochemistry & Molecular Biology

Efficient RNA polyuridylation by noncanonical poly(A) polymerases

Olivia S. Rissland et al.

MOLECULAR AND CELLULAR BIOLOGY (2007)

Article Multidisciplinary Sciences

Untemplated oligoadenylation promotes degradation of RISC-cleaved transcripts

Fadia Ibrahim et al.

SCIENCE (2006)

Article Biochemistry & Molecular Biology

A novel Zinc finger protein, ZCCHC11, interacts with TIFA and modulates TLR signaling

Yasumasa Minoda et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2006)

Article Biochemistry & Molecular Biology

Control of mammalian translation by mRNA structure near caps

JR Babendure et al.

Article Biochemistry & Molecular Biology

Rapid tRNA decay can result from lack of nonessential modifications

A Alexandrov et al.

MOLECULAR CELL (2006)

Article Biochemistry & Molecular Biology

Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei

JP Deng et al.

EMBO JOURNAL (2005)

Article Biochemistry & Molecular Biology

Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabildopsis

JJ Li et al.

CURRENT BIOLOGY (2005)

Article Biochemistry & Molecular Biology

Polyadenylation and degradation of human mitochondrial RNA: the prokaryotic past leaves its mark

S Slomovic et al.

MOLECULAR AND CELLULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

RNA degradation by the exosome is promoted by a nuclear polyade nylation complex

J LaCava et al.

Article Multidisciplinary Sciences

Methylation as a crucial step in plant microRNA biogenesis

B Yu et al.

SCIENCE (2005)

Review Biochemistry & Molecular Biology

Complex management: RNA editing in trypanosomes

KD Stuart et al.

TRENDS IN BIOCHEMICAL SCIENCES (2005)

Review Biochemistry & Molecular Biology

The enzymes and control of eukaryotic mRNA turnover

R Parker et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Messenger RNA turnover in eukaryotes: Pathways and enzymes

S Meyer et al.

CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2004)

Article Multidisciplinary Sciences

A tale of two TUTases

R Aphasizhev et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Biochemistry & Molecular Biology

TbMP57 is a 3′ terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome

NL Ernst et al.

MOLECULAR CELL (2003)

Review Biochemistry & Molecular Biology

Regulation of mRNA translation by 5′- and 3′-UTR-binding factors

GS Wilkie et al.

TRENDS IN BIOCHEMICAL SCIENCES (2003)

Article Biochemistry & Molecular Biology

Identification of novel components of Trypanosoma brucei editosomes

AK Panigrahi et al.

Article Biochemistry & Molecular Biology

Human Dcp2:: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures

E van Dijk et al.

EMBO JOURNAL (2002)

Article Biochemistry & Molecular Biology

Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay

J Lykke-Andersen

MOLECULAR AND CELLULAR BIOLOGY (2002)

Article Biochemistry & Molecular Biology

Functional link between the mammalian exosome and mRNA decapping

ZR Wang et al.

Article Multidisciplinary Sciences

Spatial and temporal control of RNA stability

A Bashirullah et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Review Biochemistry & Molecular Biology

The 3′ untranslated region of messenger RNA:: A molecular 'hotspot' for pathology?

B Conne et al.

NATURE MEDICINE (2000)

Article Biochemistry & Molecular Biology

Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase δ or ε is inactivated

SW Wang et al.

MOLECULAR AND CELLULAR BIOLOGY (2000)