Journal
TREE GENETICS & GENOMES
Volume 6, Issue 3, Pages 435-438Publisher
SPRINGER HEIDELBERG
DOI: 10.1007/s11295-009-0261-6
Keywords
SNPs; Databases; Functional genomics; Candidate genes; Molecular markers; Association mapping
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Funding
- Canadian Wood Fibre Centre
- Canadian Biotechnology Strategy-Genomics Fund
- Genome Canada
- Genome Quebec
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TreeSNPs is a laboratory information management system with a user-friendly Web interface for the gathering and display of data generated through medium- to large-scale single nucleotide polymorphism (SNP) identification by resequencing, in the context of whole genome association, outlier detection, quantitative trait locus, and genetic mapping studies. Its multi-gene approach allows the tracking of all the steps from candidate gene classification and prioritization to SNP discovery. The system, source code, and documentation are available for download at http://treesnps-pub.arborea.ulaval.ca:3000/download. An online demo version can also be accessed from the above link.
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