4.6 Article

Blimp1/Prdm1 Functions in Opposition to Irf1 to Maintain Neonatal Tolerance during Postnatal Intestinal Maturation

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

HTSeq-a Python framework to work with high-throughput sequencing data

Simon Anders et al.

BIOINFORMATICS (2015)

Article Biochemistry & Molecular Biology

Spurious transcription factor binding: Non-functional or genetically redundant?

Mikhail Spivakov

BIOESSAYS (2014)

Review Immunology

Pathways of Antigen Processing

Janice S. Blum et al.

ANNUAL REVIEW OF IMMUNOLOGY, VOL 31 (2013)

Article Biochemistry & Molecular Biology

Alternative Splicing Regulates Prdm1/Blimp-1 DNA Binding Activities and Corepressor Interactions

Marc A. J. Morgan et al.

MOLECULAR AND CELLULAR BIOLOGY (2012)

Article Biochemical Research Methods

Identifying ChIP-seq enrichment using MACS

Jianxing Feng et al.

NATURE PROTOCOLS (2012)

Article Gastroenterology & Hepatology

Hydrocortisone induces changes in gene expression and differentiation in immature human enterocytes

Lei Lu et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2011)

Article Biochemistry & Molecular Biology

Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads

Gerton Lunter et al.

GENOME RESEARCH (2011)

Article Biochemistry & Molecular Biology

Essential and Redundant Functions of Caudal Family Proteins in Activating Adult Intestinal Genes

Michael P. Verzi et al.

MOLECULAR AND CELLULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

The transcriptional repressor Blimp1/Prdm1 regulates postnatal reprogramming of intestinal enterocytes

James Harper et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Blimp1 regulates the transition of neonatal to adult intestinal epithelium

Vanesa Muncan et al.

NATURE COMMUNICATIONS (2011)

Article Biochemistry & Molecular Biology

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux et al.

PLOS BIOLOGY (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

GREAT improves functional interpretation of cis-regulatory regions

Cory Y. McLean et al.

NATURE BIOTECHNOLOGY (2010)

Article Biochemistry & Molecular Biology

An extended set of PRDM1/BLIMP1 target genes links binding motif type to dynamic repression

Gina M. Doody et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

IL-33 is a crucial amplifier of innate rather than acquired immunity

Keisuke Oboki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemical Research Methods

CEAS: cis-regulatory element annotation system

Hyunjin Shin et al.

BIOINFORMATICS (2009)

Review Cell Biology

An expanding job description for Blimp-1/PRDM1

Elizabeth K. Bikoff et al.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2009)

Article Biochemistry & Molecular Biology

Blimp-1/Prdm1 Alternative Promoter Usage during Mouse Development and Plasma Cell Differentiation

Marc A. J. Morgan et al.

MOLECULAR AND CELLULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

MEME SUITE: tools for motif discovery and searching

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Gastroenterology & Hepatology

Cellular cross talk in the small intestinal mucosa:: postnatal lymphocytic immigration elicits a specific epithelial transcriptional response

Katrine T. -B. G. Schjoldager et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2008)

Review Immunology

Regulation and functions of blimp-1 in T and B lymphocytes

Gisliine Martins et al.

ANNUAL REVIEW OF IMMUNOLOGY (2008)

Article Immunology

Blimp-1 directly represses Il2 and the Il2 activator Fos, attenuating T cell proliferation and survival

Gislaine A. Martins et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Immunology

BLIMP1 guides the fate of effector B and T cells

Stephen L. Nutt et al.

NATURE REVIEWS IMMUNOLOGY (2007)

Article Multidisciplinary Sciences

Epidermal terminal differentiation depends on B lymphocyte-induced maturation protein-1

Erna Magnusdottir et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Immunology

Cytokine-dependent blimp-1 expression in activated T cells inhibits IL-2 production

Dapeng Gong et al.

JOURNAL OF IMMUNOLOGY (2007)

Article Biochemistry & Molecular Biology

Blimp1 defines a progenitor population that governs cellular input to the sebaceous gland

Valerie Horsley et al.

Article Multidisciplinary Sciences

Blimp1 is a critical determinant of the germ cell lineage in mice

Y Ohinata et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

Regulation of mammalian epithelial differentiation and intestine development by class I histone deacetylases

LQ Tou et al.

MOLECULAR AND CELLULAR BIOLOGY (2004)

Article Immunology

Plasma cell ontogeny defined by quantitative changes in Blimp-1 expression

A Kallies et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2004)