Related references
Note: Only part of the references are listed.First insights into fern matK phylogeny
Li-Yaung Kuo et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2011)
DendroPy: a Python library for phylogenetic computing
Jeet Sukumaran et al.
BIOINFORMATICS (2010)
Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences
Jerome C. Regier et al.
NATURE (2010)
When Trees Grow Too Long: Investigating the Causes of Highly Inaccurate Bayesian Branch-Length Estimates
Jeremy M. Brown et al.
SYSTEMATIC BIOLOGY (2010)
Relaxed Molecular Clocks, the Bias-Variance Trade-off, and the Quality of Phylogenetic Inference
Joel O. Wertheim et al.
SYSTEMATIC BIOLOGY (2010)
Cryptic Failure of Partitioned Bayesian Phylogenetic Analyses: Lost in the Land of Long Trees
David C. Marshall
SYSTEMATIC BIOLOGY (2010)
Broadly Sampled Multigene Analyses Yield a Well-Resolved Eukaryotic Tree of Life
Laura Wegener Parfrey et al.
SYSTEMATIC BIOLOGY (2010)
DIFFERENT GYMNOSPERM OUTGROUPS HAVE (MOSTLY) CONGRUENT SIGNAL REGARDING THE ROOT OF FLOWERING PLANT PHYLOGENY
Sean W. Graham et al.
AMERICAN JOURNAL OF BOTANY (2009)
Inferring phylogenies with incomplete data sets: a 5-gene, 567-taxon analysis of angiosperms
J. Gordon Burleigh et al.
BMC EVOLUTIONARY BIOLOGY (2009)
Conservation of selection on matK following an ancient loss of its flanking intron
Aaron M. Duffy et al.
GENE (2009)
Evidence for a Cenozoic radiation of ferns in an angiosperm-dominated canopy
Eric Schuettpelz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Networks, Trees, and Treeshrews: Assessing Support and Identifying Conflict with Multiple Loci and a Problematic Root
Trina E. Roberts et al.
SYSTEMATIC BIOLOGY (2009)
Phylogenetic Inference Using Whole Genomes
Bruce Rannala et al.
Annual Review of Genomics and Human Genetics (2008)
Empirical evaluation of a prior for Bayesian phylogenetic inference
Ziheng Yang
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
On the Distributions of Bootstrap Support and Posterior Distributions for a Star Tree
Edward Susko
SYSTEMATIC BIOLOGY (2008)
Resolving an ancient, rapid radiation in Saxifragales
Shuguang Jian et al.
SYSTEMATIC BIOLOGY (2008)
AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
Johan A. A. Nylander et al.
BIOINFORMATICS (2008)
Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes
Eric Schuettpelz et al.
TAXON (2007)
Molecular phylogeny of the fern family dryopteridaceae inferred from chloroplast rbcL and atpB genes
Hong-Mei Liu et al.
INTERNATIONAL JOURNAL OF PLANT SCIENCES (2007)
Fossils impact as hard as living taxa in parsimony analyses of morphology
Andrea Cobbett et al.
SYSTEMATIC BIOLOGY (2007)
A molecular phylogeny of the fern family Pteridaceae: Assessing overall relationships and the affinities of previously unsampled genera
Eric Schuettpelz et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2007)
Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups
Bjoern M. Hallstroem et al.
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Fair-balance paradox, star-tree paradox, and Bayesian phylogenetics
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Deciphering ancient rapid radiations
James B. Whitfield et al.
TRENDS IN ECOLOGY & EVOLUTION (2007)
A molecular phylogeny of scaly tree ferns (Cyatheaceae)
Petra Korall et al.
AMERICAN JOURNAL OF BOTANY (2007)
The Bayesian star paradox persists for long finite sequences
Mike Steel et al.
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Molecular phylogenetic relationships and morphological evolution in the heterosporous fern genus Marsilea
Nathalie S. Nagalingum et al.
SYSTEMATIC BOTANY (2007)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
Plastid atpA data provide improved support for deep relationships among ferns
Eric Schuettpelz et al.
TAXON (2006)
A mitogenomic timescale for birds detects variable phylogenetic rates of molecular evolution and refutes the standard molecular clock
Sergio L. Pereira et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Inferring the root of Isoetes:: Exploring alternatives in the absence of an acceptable outgroup
Eric Schuettpelz et al.
SYSTEMATIC BOTANY (2006)
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
ZH Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Unearthing the molecular phylodiversity of desert soil green algae (Chlorophyta)
LA Lewis et al.
SYSTEMATIC BIOLOGY (2005)
Heterotachy and long-branch attraction in phylogenetics
H Philippe et al.
BMC EVOLUTIONARY BIOLOGY (2005)
Branch-length prior influences Bayesian posterior probability of phylogeny
Z Yang et al.
SYSTEMATIC BIOLOGY (2005)
Polytomies and Bayesian phylogenetic inference
PO Lewis et al.
SYSTEMATIC BIOLOGY (2005)
Ferns diversified in the shadow of angiosperms
H Schneider et al.
NATURE (2004)
Chloroplast Phylogeny of asplenioid ferns based on rbcL and trnL-F Spacer sequences (Polypodiidae, aspleniaceae) and its implications for biogeography
H Schneider et al.
SYSTEMATIC BOTANY (2004)
Parallel metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
G Altekar et al.
BIOINFORMATICS (2004)
Tracing the decay of the historical signal in biological sequence data
SYW Ho et al.
SYSTEMATIC BIOLOGY (2004)
Dating lineages:: Molecular and paleontological approaches to the temporal framework of clades
SA Magallón
INTERNATIONAL JOURNAL OF PLANT SCIENCES (2004)
Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA
FE Anderson et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2004)
Phylogenetic inference in Rafflesiales: the influence of rate heterogeneity and horizontal gene transfer
DL Nickrent et al.
BMC EVOLUTIONARY BIOLOGY (2004)
Genome-scale data, angiosperm relationships, and 'ending incongruence': a cautionary tale in phylogenetics
DE Soltis et al.
TRENDS IN PLANT SCIENCE (2004)
Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences
KM Pryer et al.
AMERICAN JOURNAL OF BOTANY (2004)
MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist et al.
BIOINFORMATICS (2003)
Missing data, incomplete taxa, and phylogenetic accuracy
JJ Wiens
SYSTEMATIC BIOLOGY (2003)
Comparing bootstrap and posterior probability values in the four-taxon case
MP Cummings et al.
SYSTEMATIC BIOLOGY (2003)
Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence
ME Alfaro et al.
MOLECULAR BIOLOGY AND EVOLUTION (2003)
Increased taxon sampling greatly reduces phylogenetic error
DJ Zwickl et al.
SYSTEMATIC BIOLOGY (2002)
Inferring the root of a phylogenetic tree
JP Huelsenbeck et al.
SYSTEMATIC BIOLOGY (2002)
Diplazium subsinuatum and Di. tomitaroanum should be moved to Deparia according to molecular, morphological, and cytological characters
R Sano et al.
JOURNAL OF PLANT RESEARCH (2000)
Phylogeny of the lady fern group, tribe Physematieae (Dryopteridaceae), based on chloroplast rbcL gene sequences
R Sano et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2000)
Share Paper
