4.7 Article

Evidence for horizontal transfer of mitochondrial DNA to the plastid genome in a bamboo genus

Related references

Note: Only part of the references are listed.
Article Evolutionary Biology

Evolution of the bamboos (Bambusoideae; Poaceae): a full plastome phylogenomic analysis

William P. Wysocki et al.

BMC EVOLUTIONARY BIOLOGY (2015)

Article Plant Sciences

BIOGEOGRAPHY AND PHYLOGENOMICS OF NEW WORLD BAMBUSOIDEAE (POACEAE), REVISITED

Sean V. Burke et al.

AMERICAN JOURNAL OF BOTANY (2014)

Article Biochemical Research Methods

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis

BIOINFORMATICS (2014)

Article Genetics & Heredity

Patterns of Genomic Integration of Nuclear Chloroplast DNA Fragments in Plant Species

Takanori Yoshida et al.

DNA RESEARCH (2014)

Article Evolutionary Biology

History of Plastid DNA Insertions Reveals Weak Deletion and AT Mutation Biases in Angiosperm Mitochondrial Genomes

Daniel B. Sloan et al.

GENOME BIOLOGY AND EVOLUTION (2014)

Article Biochemistry & Molecular Biology

A molecular phylogeny of Raddia and its allies within the tribe Olyreae (Poaceae, Bambusoideae) based on noncoding plastid and nuclear spacers

Reyjane P. Oliveira et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2014)

Article Plant Sciences

Mitochondrion-to-plastid DNA transfer: it happens

David Roy Smith

NEW PHYTOLOGIST (2014)

Article Multidisciplinary Sciences

Transfer of noncoding DNA drives regulatory rewiring in bacteria

Yaara Oren et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Multidisciplinary Sciences

Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns

Fay-Wei Li et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

Higher level phylogenetic relationships within the bamboos (Poaceae: Bambusoideae) based on five plastid markers

Scot A. Kelchner

MOLECULAR PHYLOGENETICS AND EVOLUTION (2013)

Article Evolutionary Biology

The Complete Chloroplast Genome of Ginkgo biloba Reveals the Mechanism of Inverted Repeat Contraction

Ching-Ping Lin et al.

GENOME BIOLOGY AND EVOLUTION (2012)

Article Evolutionary Biology

Extending the Limited Transfer Window Hypothesis to Inter-organelle DNA Migration

David Roy Smith

GENOME BIOLOGY AND EVOLUTION (2011)

Article Biochemistry & Molecular Biology

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Article Biochemistry & Molecular Biology

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

Susann Wicke et al.

PLANT MOLECULAR BIOLOGY (2011)

Article Biochemical Research Methods

Fast and accurate long-read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

De novo assembly of human genomes with massively parallel short read sequencing

Ruiqiang Li et al.

GENOME RESEARCH (2010)

Article Biochemistry & Molecular Biology

Insights into the Evolution of Mitochondrial Genome Size from Complete Sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae)

Andrew J. Alverson et al.

MOLECULAR BIOLOGY AND EVOLUTION (2010)

Review Plant Sciences

The give-and-take of DNA: horizontal gene transfer in plants

Ralph Bock

TRENDS IN PLANT SCIENCE (2010)

Review Plant Sciences

DNA Transfer from Organelles to the Nucleus: The Idiosyncratic Genetics of Endosymbiosis

Tatjana Kleine et al.

ANNUAL REVIEW OF PLANT BIOLOGY (2009)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Mitochondrial DNA of Vitis vinifera and the Issue of Rampant Horizontal Gene Transfer

Vadim V. Goremykin et al.

MOLECULAR BIOLOGY AND EVOLUTION (2009)

Article Biochemistry & Molecular Biology

Gene relocations within chloroplast genomes of Jasminum and Menodora (Oleaceae) are due to multiple, overlapping inversions

Hea-Lim Lee et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Plant Sciences

Horizontal gene transfer in plants

Aaron O. Richardson et al.

JOURNAL OF EXPERIMENTAL BOTANY (2007)

Article Biochemical Research Methods

Automatic annotation of organellar genomes with DOGMA

SK Wyman et al.

BIOINFORMATICS (2004)

Article Biochemical Research Methods

VISTA:: visualizing global DNA sequence alignments of arbitrary length

C Mayor et al.

BIOINFORMATICS (2000)