Related references
Note: Only part of the references are listed.mRNA Deadenylation Is Coupled to Translation Rates by the Differential Activities of Ccr4-Not Nucleases
Michael W. Webster et al.
MOLECULAR CELL (2018)
Codon-specific translation reprogramming promotes resistance to targeted therapy
Francesca Rapino et al.
NATURE (2018)
ALKBH1-Mediated tRNA Demethylation Regulates Translation
Fange Liu et al.
CELL (2016)
Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression
Hani Goodarzi et al.
CELL (2016)
Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States
Konrad L. M. Rudolph et al.
PLOS GENETICS (2016)
Optimization of Codon Translation Rates via tRNA Modifications Maintains Proteome Integrity
Danny D. Nedialkova et al.
CELL (2015)
Codon Optimality Is a Major Determinant of mRNA Stability
Vladimir Presnyak et al.
CELL (2015)
Pausing on Polyribosomes: Make Way for Elongation in Translational Control
Joel D. Richter et al.
CELL (2015)
The Levels of a Universally Conserved tRNA Modification Regulate Cell Growth
Diego Rojas-Benitez et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Efficient and quantitative high-throughput tRNA sequencing
Guanqun Zheng et al.
NATURE METHODS (2015)
Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate
Thomas E. Gorochowski et al.
NUCLEIC ACIDS RESEARCH (2015)
Rationally designed, heterologous S. cerevisiae transcripts expose novel expression determinants
Tuval Ben-Yehezkel et al.
RNA BIOLOGY (2015)
Codon-biased translation can be regulated by wobble-base tRNA modification systems during cellular stress responses
Lauren Endres et al.
RNA BIOLOGY (2015)
Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling
Kevin Van Bortle et al.
RNA (2015)
Trm9-Catalyzed tRNA Modifications Regulate Global Protein Expression by Codon-Biased Translation
Wenjun Deng et al.
PLOS GENETICS (2015)
Mean of the Typical Decoding Rates: A New Translation Efficiency Index Based on the Analysis of Ribosome Profiling Data
Alexandra Dana et al.
G3-GENES GENOMES GENETICS (2015)
Multiobjective evolutionary algorithms to identify highly autocorrelated areas: the case of spatial distribution in financially compromised farms
Carlos R. Garcia-Alonso et al.
ANNALS OF OPERATIONS RESEARCH (2014)
A Dual Program for Translation Regulation in Cellular Proliferation and Differentiation
Hila Gingold et al.
CELL (2014)
Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders
Sandra Blanco et al.
EMBO JOURNAL (2014)
Systematic identification of tRNAome and its dynamics in Lactococcus lactis
Pranav Puri et al.
MOLECULAR MICROBIOLOGY (2014)
Diverse cell stresses induce unique patterns of tRNA up- and down-regulation: tRNA-seq for quantifying changes in tRNA copy number
Yan Ling Joy Pang et al.
NUCLEIC ACIDS RESEARCH (2014)
The effect of tRNA levels on decoding times of mRNA codons
Alexandra Dana et al.
NUCLEIC ACIDS RESEARCH (2014)
A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool
Zohar Bloom-Ackermann et al.
PLOS GENETICS (2014)
Translational reprogramming in cellular stress response
Botao Liu et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2014)
Rate-Limiting Steps in Yeast Protein Translation
Premal Shah et al.
CELL (2013)
A novel single-cell screening platform reveals proteome plasticity during yeast stress responses
Michal Breker et al.
JOURNAL OF CELL BIOLOGY (2013)
Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding
Sebastian Pechmann et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability
Sibylle E. Wohlgemuth et al.
NUCLEIC ACIDS RESEARCH (2013)
Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling
Boris Zinshteyn et al.
PLOS GENETICS (2013)
tRNA genes rapidly change in evolution to meet novel translational demands
Avihu H. Yona et al.
ELIFE (2013)
Genes adopt non-optimal codon usage to generate cell cycle-dependent oscillations in protein levels
Milana Frenkel-Morgenstern et al.
MOLECULAR SYSTEMS BIOLOGY (2012)
Saccharomyces Genome Database: the genomics resource of budding yeast
J. Michael Cherry et al.
NUCLEIC ACIDS RESEARCH (2012)
Dynamic changes in translational efficiency are deduced from codon usage of the transcriptome
Hila Gingold et al.
NUCLEIC ACIDS RESEARCH (2012)
Genome-wide ribosome profiling reveals complex translational regulation in response to oxidative stress
Maxim V. Gerashchenko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Maf1-mediated repression of RNA polymerase III transcription inhibits tRNA degradation via RTD pathway
Tomasz W. Turowski et al.
RNA (2012)
Speeding with control: codon usage, tRNAs, and ribosomes
Eva Maria Novoa et al.
TRENDS IN GENETICS (2012)
P-Bodies and Stress Granules: Possible Roles in the Control of Translation and mRNA Degradation
Carolyn J. Decker et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2012)
Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins
Clement T. Y. Chan et al.
NATURE COMMUNICATIONS (2012)
Visual gene developer: a fully programmable bioinformatics software for synthetic gene optimization
Sang-Kyu Jung et al.
BMC BIOINFORMATICS (2011)
Determinants of translation efficiency and accuracy
Hila Gingold et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation
Tamir Tuller et al.
CELL (2010)
Eukaryotic initiator tRNA: Finely tuned and ready for action
Sarah E. Kolitz et al.
FEBS LETTERS (2010)
Translational Regulation of Gene Expression during Conditions of Cell Stress
Keith A. Spriggs et al.
MOLECULAR CELL (2010)
Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae
Marie-Ange Teste et al.
BMC MOLECULAR BIOLOGY (2009)
The RNase Rny1p cleaves tRNAs and promotes cell death during oxidative stress in Saccharomyces cerevisiae
Debrah M. Thompson et al.
JOURNAL OF CELL BIOLOGY (2009)
Coding-Sequence Determinants of Gene Expression in Escherichia coli
Grzegorz Kudla et al.
SCIENCE (2009)
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
Nicholas T. Ingolia et al.
SCIENCE (2009)
Reprogramming mRNA translation during stress
Satoshi Yamasaki et al.
CURRENT OPINION IN CELL BIOLOGY (2008)
Single-RNA counting reveals alternative modes of gene expression in yeast
Daniel Zenklusen et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
The Vienna RNA Websuite
Andreas R. Gruber et al.
NUCLEIC ACIDS RESEARCH (2008)
Comparative genomics of the environmental stress response in ascomycete fungi
Audrey P. Gasch
YEAST (2007)
Tissue-specific differences in human transfer RNA expression
Kimberly A. Dittmar et al.
PLOS GENETICS (2006)
Retrograde movement of tRNAs from the cytoplasm to the nucleus in Saccharomyces cerevisiae
HH Shaheen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Selective charging of tRNA isoacceptors induced by amino-acid starvation
KA Dittmar et al.
EMBO REPORTS (2005)
Exploring the regulation of tRNA distribution on the genomic scale
KA Dittmar et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
Solving the riddle of codon usage preferences: a test for translational selection
M dos Reis et al.
NUCLEIC ACIDS RESEARCH (2004)
Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K-12 genome
M dos Reis et al.
NUCLEIC ACIDS RESEARCH (2003)
Ribosome bypassing elicited by tRNA depletion
D Lindsley et al.
MOLECULAR MICROBIOLOGY (2003)
Systematic identification of pathways that couple cell growth and division in yeast
P Jorgensen et al.
SCIENCE (2002)
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele et al.
GENOME BIOLOGY (2002)
Codon usage and tRNA genes in eukaryotes: Correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis
S Kanaya et al.
JOURNAL OF MOLECULAR EVOLUTION (2001)
Charging levels of four tRNA species in Escherichia coli Rel+ and Rel- strains during amino acid starvation:: A simple model for the effect of ppGpp on translational accuracy
MA Sorensen
JOURNAL OF MOLECULAR BIOLOGY (2001)
Genomic expression programs in the response of yeast cells to environmental changes
AP Gasch et al.
MOLECULAR BIOLOGY OF THE CELL (2000)