4.8 Article

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis

BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

Positive selection drives accelerated evolution of mosquito salivary genes associated with blood-feeding

B. Arca et al.

INSECT MOLECULAR BIOLOGY (2014)

Article Biochemistry & Molecular Biology

The Ontogeny and Evolution of Sex-Biased Gene Expression in Drosophila melanogaster

Jennifer C. Perry et al.

MOLECULAR BIOLOGY AND EVOLUTION (2014)

Article Biochemistry & Molecular Biology

eggNOG v4.0: nested orthology inference across 3686 organisms

Sean Powell et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

Activities at the Universal Protein Resource (UniProt)

Rolf Apweiler et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

miRBase: annotating high confidence microRNAs using deep sequencing data

Ana Kozomara et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Multigene Phylogenetics Reveals Temporal Diversification of Major African Malaria Vectors

Maryam Kamali et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

Mating activates the heme peroxidase HPX15 in the sperm storage organ to ensure fertility in Anopheles gambiae

W. Robert Shaw et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biotechnology & Applied Microbiology

Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi

Xiaofang Jiang et al.

GENOME BIOLOGY (2014)

Review Entomology

Host Preferences of Blood-Feeding Mosquitoes

Willem Takken et al.

ANNUAL REVIEW OF ENTOMOLOGY, VOL 58 (2013)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Article Biotechnology & Applied Microbiology

Transcriptional and epigenetic signatures of zygotic genome activation during early drosophila embryogenesis

Elodie Darbo et al.

BMC GENOMICS (2013)

Article Biochemistry & Molecular Biology

Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3

Mira V. Han et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

A Network Model of the Molecular Organization of Chromatin in Drosophila

Joke G. van Bemmel et al.

MOLECULAR CELL (2013)

Article Biochemistry & Molecular Biology

Rfam 11.0: 10 years of RNA families

Sarah W. Burge et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemistry & Molecular Biology

OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs

Robert M. Waterhouse et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemistry & Molecular Biology

The Genome of Anopheles darlingi, the main neotropical malaria vector

Osvaldo Marinotti et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Multidisciplinary Sciences

Heterologous Stop Codon Readthrough of Metazoan Readthrough Candidates in Yeast

Clara S. Chan et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Pyrethroid activity-based probes for profiling cytochrome P450 activities associated with insecticide interactions

Hanafy M. Ismail et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Multidisciplinary Sciences

Blood meal-induced changes to antennal transcriptome profiles reveal shifts in odor sensitivities in Anopheles gambiae

David C. Rinker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Genetics & Heredity

The Evolution of the Anopheles 16 Genomes Project

Daniel E. Neafsey et al.

G3-GENES GENOMES GENETICS (2013)

Article Biochemical Research Methods

UniMoG-a unifying framework for genomic distance calculation and sorting based on DCJ

Rolf Hilker et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

ANGES: reconstructing ANcestral GEnomeS maps

Bradley R. Jones et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

Processing-independent analysis of peptide hormones and prohormones in plasma

Jens Peter Goetze et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2012)

Article Biochemistry & Molecular Biology

Epigenetic regulation of transcription in Drosophila

Aishwarya Swaminathan et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2012)

Article Evolutionary Biology

Sex-Biased Transcriptome Evolution in Drosophila

Raquel Assis et al.

GENOME BIOLOGY AND EVOLUTION (2012)

Article Biochemistry & Molecular Biology

Paired-end sequencing of Fosmid libraries by Illumina

Louise J. S. Williams et al.

GENOME RESEARCH (2012)

Article Entomology

Multiple blood meals in Anopheles darlingi (Diptera: Culicidae)

Caroline Dantas de Oliveira et al.

JOURNAL OF VECTOR ECOLOGY (2012)

Article Biochemistry & Molecular Biology

Evolution at the Subgene Level: Domain Rearrangements in the Drosophila Phylogeny

Yi-Chieh Wu et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Article Biochemistry & Molecular Biology

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

Robert Lanfear et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Review Immunology

Inflammasomes in carcinogenesis and anticancer immune responses

Laurence Zitvogel et al.

NATURE IMMUNOLOGY (2012)

Review Biotechnology & Applied Microbiology

Epigenetic protein families: a new frontier for drug discovery

Cheryl H. Arrowsmith et al.

NATURE REVIEWS DRUG DISCOVERY (2012)

Article Biochemistry & Molecular Biology

VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics

Karine Megy et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Parasitology

A global map of dominant malaria vectors

Marianne E. Sinka et al.

PARASITES & VECTORS (2012)

Article Multidisciplinary Sciences

Identification and validation of a gene causing cross-resistance between insecticide classes in Anopheles gambiae from Ghana

Sara N. Mitchell et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Review Genetics & Heredity

Speeding with control: codon usage, tRNAs, and ribosomes

Eva Maria Novoa et al.

TRENDS IN GENETICS (2012)

Review Public, Environmental & Occupational Health

Function and composition of male accessory gland secretions in Anopheles gambiae: a comparison with other insect vectors of infectious diseases

Francesco Baldini et al.

PATHOGENS AND GLOBAL HEALTH (2012)

Article Genetics & Heredity

Detecting Individual Sites Subject to Episodic Diversifying Selection

Ben Murrell et al.

PLOS GENETICS (2012)

Article Immunology

Multiple-Insecticide Resistance in Anopheles gambiae Mosquitoes, Southern Cote d'Ivoire

Constant V. A. Edi et al.

EMERGING INFECTIOUS DISEASES (2012)

Review Entomology

Insect Seminal Fluid Proteins: Identification and Function

Frank W. Avila et al.

ANNUAL REVIEW OF ENTOMOLOGY, VOL 56 (2011)

Article Biochemical Research Methods

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

Michael F. Lin et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

An automated homology-based approach for identifying transposable elements

Ryan C. Kennedy et al.

BMC BIOINFORMATICS (2011)

Article Biochemical Research Methods

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

Carson Holt et al.

BMC BIOINFORMATICS (2011)

Article Biochemical Research Methods

Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation

Torbjorn Rognes

BMC BIOINFORMATICS (2011)

Article Biotechnology & Applied Microbiology

A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae

Dean A. Baker et al.

BMC GENOMICS (2011)

Article Developmental Biology

CYP18A1, a key enzyme of Drosophila steroid hormone inactivation, is essential for metamorphosis

Emilie Guittard et al.

DEVELOPMENTAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Evidence of abundant stop codon readthrough in Drosophila and other metazoa

Irwin Jungreis et al.

GENOME RESEARCH (2011)

Article Biochemistry & Molecular Biology

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Article Multidisciplinary Sciences

A high-resolution map of human evolutionary constraint using 29 mammals

Kerstin Lindblad-Toh et al.

NATURE (2011)

Article Biotechnology & Applied Microbiology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Manfred G. Grabherr et al.

NATURE BIOTECHNOLOGY (2011)

Article Biochemistry & Molecular Biology

OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011

Robert M. Waterhouse et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

A Deep Insight into the Sialotranscriptome of the Gulf Coast Tick, Amblyomma maculatum

Shahid Karim et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Comparative Genomics of the Anopheline Glutathione S-Transferase Epsilon Cluster

Constancia Ayres et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

Sante Gnerre et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Aquaporin water channel AgAQP1 in the malaria vector mosquito Anopheles gambiae during blood feeding and humidity adaptation

Kun Liu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Neurosciences

Phosphorylation via PKC regulates the function of the Drosophila odorant co-receptor

Vardanush Sargsyan et al.

FRONTIERS IN CELLULAR NEUROSCIENCE (2011)

Article Infectious Diseases

The JAK-STAT Pathway Controls Plasmodium vivax Load in Early Stages of Anopheles aquasalis Infection

Ana C. Bahia et al.

PLOS NEGLECTED TROPICAL DISEASES (2011)

Article Public, Environmental & Occupational Health

A Physical Map for an Asian Malaria Mosquito, Anopheles stephensi

Maria V. Sharakhova et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2010)

Article Biochemical Research Methods

Pathgroups, a dynamic data structure for genome reconstruction problems

Chunfang Zheng

BIOINFORMATICS (2010)

Article Biochemical Research Methods

genoPlotR: comparative gene and genome visualization in R

Lionel Guy et al.

BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

Sequence-structure-function relations of the mosquito leucine-rich repeat immune proteins

Robert M. Waterhouse et al.

BMC GENOMICS (2010)

Article Biochemistry & Molecular Biology

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

Guillaume J. Filion et al.

Article Genetics & Heredity

Retrogenes Reveal the Direction of Sex-Chromosome Evolution in Mosquitoes

Melissa A. Toups et al.

GENETICS (2010)

Article Biochemistry & Molecular Biology

Fragile regions and not functional constraints predominate in shaping gene organization in the genus Drosophila

Marcin von Grotthuss et al.

GENOME RESEARCH (2010)

Review Biochemistry & Molecular Biology

Structural cuticular proteins from arthropods: Annotation, nomenclature, and sequence characteristics in the genomics era

Judith H. Willis

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2010)

Review Biochemistry & Molecular Biology

An insight into the sialome of blood-feeding Nematocera

Jose M. C. Ribeiro et al.

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

High-resolution cytogenetic map for the African malaria vector Anopheles gambiae

P. George et al.

INSECT MOLECULAR BIOLOGY (2010)

Review Cell Biology

PKC and the control of localized signal dynamics

Carine Rosse et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)

Article Multidisciplinary Sciences

Anopheles Immune Genes and Amino Acid Sites Evolving Under the Effect of Positive Selection

Aristeidis Parmakelis et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

The Aquaporin Gene Family of the Yellow Fever Mosquito, Aedes aegypti

Lisa L. Drake et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics

Peter Arensburger et al.

SCIENCE (2010)

Review Parasitology

Evolutionary forces on Anopheles: what makes a malaria vector?

Anna Cohuet et al.

TRENDS IN PARASITOLOGY (2010)

Article Biochemical Research Methods

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

Salvador Capella-Gutierrez et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

TopHat: discovering splice junctions with RNA-Seq

Cole Trapnell et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models

Sabah Kadri et al.

BMC BIOINFORMATICS (2009)

Article Developmental Biology

Developmental and evolutionary basis for drought tolerance of the Anopheles gambiae embryo

Yury Goltsev et al.

DEVELOPMENTAL BIOLOGY (2009)

Article Cell Biology

A Fat Body-Derived IGF-like Peptide Regulates Postfeeding Growth in Drosophila

Naoki Okamoto et al.

DEVELOPMENTAL CELL (2009)

Article Biochemistry & Molecular Biology

Breakpoint graphs and ancestral genome reconstructions

Max A. Alekseyev et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

Annotation and analysis of low-complexity protein families of Anopheles gambiae that are associated with cuticle

R. S. Cornman et al.

INSECT MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Anopheles Fibrinogen-related Proteins Provide Expanded Pattern Recognition Capacity against Bacteria and Malaria Parasites

Yuemei Dong et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Article Biochemistry & Molecular Biology

Two C-type Lectins Cooperate to Defend Anopheles gambiae against Gram-negative Bacteria

Anna K. D. Schnitger et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Article Multidisciplinary Sciences

Molecular Evolution of Immune Genes in the Malaria Mosquito Anopheles gambiae

Tovi Lehmann et al.

PLOS ONE (2009)

Article Multidisciplinary Sciences

Molecular Evolution of Drosophila Cuticular Protein Genes

R. Scott Cornman

PLOS ONE (2009)

Article Biochemistry & Molecular Biology

Transglutaminase-Mediated Semen Coagulation Controls Sperm Storage in the Malaria Mosquito

David W. Rogers et al.

PLOS BIOLOGY (2009)

Article Biochemical Research Methods

Malin:: maximum likelihood analysis of intron evolution in eukaryotes

Miklos Csuros

BIOINFORMATICS (2008)

Article Evolutionary Biology

The evolution of TEP1, an exceptionally polymorphic immunity gene in Anopheles gambiae

Darren J. Obbard et al.

BMC EVOLUTIONARY BIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Annotation and analysis of a large cuticular protein family with the R&R Consensus in Anopheles gambiae

R. Scott Cornman et al.

BMC GENOMICS (2008)

Review Genetics & Heredity

Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes

Arjun Bhutkar et al.

GENETICS (2008)

Article Biochemistry & Molecular Biology

Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes

R. Scott Cornman et al.

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Developmental expression patterns of cuticular protein genes with the R&R Consensus from Anopheles gambiae

Toru Togawa et al.

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2008)

Article Evolutionary Biology

A Rapid Bootstrap Algorithm for the RAxML Web Servers

Alexandros Stamatakis et al.

SYSTEMATIC BIOLOGY (2008)

Article Biochemical Research Methods

SnoReport: computational identification of snoRNAs with unknown targets

Jana Hertel et al.

BIOINFORMATICS (2008)

Article Biochemistry & Molecular Biology

OrthoDB: the hierarchical catalog of eukaryotic orthologs

Evgenia V. Kriventseva et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes

Michael F. Lin et al.

GENOME RESEARCH (2007)

Article Evolutionary Biology

Codon usage in twelve species of Drosophila

Saverio Vicario et al.

BMC EVOLUTIONARY BIOLOGY (2007)

Article Multidisciplinary Sciences

Evolution of genes and genomes on the Drosophila phylogeny

Andrew G. Clark et al.

NATURE (2007)

Review Multidisciplinary Sciences

Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

Alexander Stark et al.

NATURE (2007)

Article Biochemical Research Methods

Clustal W and clustal X version 2.0

M. A. Larkin et al.

BIOINFORMATICS (2007)

Article Genetics & Heredity

Gene family evolution across 12 Drosophila genomes

Matthew W. Hahn et al.

PLOS GENETICS (2007)

Article Multidisciplinary Sciences

A genome-wide analysis in Anopheles gambiae mosquitoes reveals 46 male accessory gland genes, possible modulators of female behavior

Tania Dottorini et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

PAML 4: Phylogenetic analysis by maximum likelihood

Ziheng Yang

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Multidisciplinary Sciences

Structural basis for conserved complement factor-like function in the antimalarial protein TEN

Richard H. G. Baxter et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemical Research Methods

Multiple alignment by aligning alignments

Travis J. Wheeler et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

CPF and CPFL, two related gene families encoding cuticular proteins of Anopheles gambiae and other insects

Toru Togawa et al.

INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2007)

Article Parasitology

CLIP proteases and Plasmodium melanization in Anopheles gambiae

Carolina Barillas-Mury

TRENDS IN PARASITOLOGY (2007)

Article Multidisciplinary Sciences

Genome sequence of Aedes aegypti, a major arbovirus vector

Vishvanath Nene et al.

SCIENCE (2007)

Article Multidisciplinary Sciences

Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes

Robert M. Waterhouse et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

Drosophila mojoless, a retroposed GSK-3, has functionally diverged to acquire an essential role in male fertility

Rasika Kalamegham et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Biochemical Research Methods

Using GOstats to test gene lists for GO term association

S. Falcon et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

Evolution of insect P450

R. Feyereisen

BIOCHEMICAL SOCIETY TRANSACTIONS (2006)

Article Biochemical Research Methods

RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis

BIOINFORMATICS (2006)

Article Cell Biology

A genetic module regulates the melanization response of Anopheles to Plasmodium

Jennifer Volz et al.

CELLULAR MICROBIOLOGY (2006)

Article Biochemistry & Molecular Biology

Molecular evolution of seminal proteins in field crickets

Jose A. Andres et al.

MOLECULAR BIOLOGY AND EVOLUTION (2006)

Article Biochemistry & Molecular Biology

PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

Mikita Suyama et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

Function and evolution of a mosquito salivary protein family

E Calvo et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2006)

Article Biochemistry & Molecular Biology

The roles of two clip domain serine proteases in innate immune responses of the malaria vector Anopheles gambiae

J Volz et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Article Multidisciplinary Sciences

An immune-responsive serpin, SRPN6, mediates mosquito defense against malaria parasites

EG Abraham et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

Anopheles gambiae SRPN2 facilitates midgut invasion by the malaria parasite Plasmodium berghei

K Michel et al.

EMBO REPORTS (2005)

Review Genetics & Heredity

How malaria has affected the human genome and what human genetics can teach us about malaria

DP Kwiatkowski

AMERICAN JOURNAL OF HUMAN GENETICS (2005)

Article Biochemistry & Molecular Biology

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

M Stanke et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs

P Schattner et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemical Research Methods

De novo identification of repeat families in large genomes

AL Price et al.

BIOINFORMATICS (2005)

Article Biochemical Research Methods

HyPhy: hypothesis testing using phylogenies

SLK Pond et al.

BIOINFORMATICS (2005)

Article Biochemical Research Methods

Automated generation of heuristics for biological sequence comparison

GS Slater et al.

BMC BIOINFORMATICS (2005)

Article Cell Biology

Repbase update, a database of eukaryotic repetitive elements

J Jurka et al.

CYTOGENETIC AND GENOME RESEARCH (2005)

Article Biochemistry & Molecular Biology

Aligning multiple genomic sequences with the threaded blockset aligner

M Blanchette et al.

GENOME RESEARCH (2004)

Article Multidisciplinary Sciences

Effects of mosquito genes on Plasmodium development

MA Osta et al.

SCIENCE (2004)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

Thioester-containing proteins and insect immunity

S Blandin et al.

MOLECULAR IMMUNOLOGY (2004)

Article Biochemistry & Molecular Biology

RPG: the Ribosomal Protein Gene database

A Nakao et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

Solving the riddle of codon usage preferences: a test for translational selection

M dos Reis et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemical Research Methods

Gene finding in novel genomes

I Korf

BMC BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

GeneWise and genomewise

E Birney et al.

GENOME RESEARCH (2004)

Review Biochemistry & Molecular Biology

Emerging and diverse roles of protein kinase C in immune cell signalling

SL Tan et al.

BIOCHEMICAL JOURNAL (2003)

Article Biochemical Research Methods

The COG database: an updated version includes eukaryotes

RL Tatusov et al.

BMC BIOINFORMATICS (2003)

Article Biochemistry & Molecular Biology

Retroposed new genes out of the X in Drosophila

E Betrán et al.

GENOME RESEARCH (2002)

Article Multidisciplinary Sciences

A polytene chromosome analysis of the Anopheles gambiae species complex

M Coluzzi et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

Immunity-related genes and gene families in Anopheles gambiae

GK Christophides et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

The genome sequence of the malaria mosquito Anopheles gambiae

RA Holt et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

Evolution of supergene families associated with insecticide resistance

H Ranson et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

Inversions and gene order shuffling in Anopheles gambiae and A-funestus

IV Sharakhov et al.

SCIENCE (2002)

Review Biochemistry & Molecular Biology

Protein kinase c (PKC) isoforms in Drosophila

BH Shieh et al.

JOURNAL OF BIOCHEMISTRY (2002)

Article Biochemistry & Molecular Biology

Automated de novo identification of repeat sequence families in sequenced genomes

ZR Bao et al.

GENOME RESEARCH (2002)

Article Biochemistry & Molecular Biology

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

K Katoh et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Multidisciplinary Sciences

Origin of sphinx, a young chimeric RNA gene in Drosophila melanogaster

W Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Biochemistry & Molecular Biology

An efficient algorithm for large-scale detection of protein families

AJ Enright et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemical Research Methods

GRIMM: genome rearrangements web server

G Tesler

BIOINFORMATICS (2002)

Article Biochemistry & Molecular Biology

A novel stop codon readthrough mechanism produces functional Headcase protein in Drosophila trachea

P Steneberg et al.

EMBO REPORTS (2001)

Article Evolutionary Biology

Maintenance of chromosome arm integrity between two Anopheles mosquito subgenera

AJ Cornel et al.

JOURNAL OF HEREDITY (2000)

Review Multidisciplinary Sciences

The genome sequence of Drosophila melanogaster

MD Adams et al.

SCIENCE (2000)

Article Biochemical Research Methods

NOTUNG: A program for dating gene duplications and optimizing gene family trees

K Chen et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2000)