4.8 Article

Diversity and Complexity in DNA Recognition by Transcription Factors

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

High-resolution DNA-binding specificity analysis of yeast transcription factors

Cong Zhu et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

UniPROBE: an online database of protein binding microarray data on protein-DNA interactions

Daniel E. Newburger et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biochemistry & Molecular Biology

Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

Michael F. Berger et al.

Article Multidisciplinary Sciences

Predicting expression patterns from regulatory sequence in Drosophila segmentation

Eran Segal et al.

NATURE (2008)

Article Multidisciplinary Sciences

A systems approach to measuring the binding energy landscapes of transcription factors

Sebastian J. Maerkl et al.

SCIENCE (2007)

Article Biotechnology & Applied Microbiology

Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities

Michael F. Berger et al.

NATURE BIOTECHNOLOGY (2006)

Article Biochemistry & Molecular Biology

Extensive low-affinity transcriptional interactions in the yeast genome

Amos Tanay

GENOME RESEARCH (2006)

Article Biochemistry & Molecular Biology

TRANSFAC (R) and its module TRANSCompel (R): transcriptional gene regulation in eukaryotes

V. Matys et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biotechnology & Applied Microbiology

Explicit equilibrium modeling of transcription-factor binding and gene regulation

JA Granek et al.

GENOME BIOLOGY (2005)

Article Biochemistry & Molecular Biology

WebLogo: A sequence logo generator

GE Crooks et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

Multiple sequence alignment with the Clustal series of programs

R Chenna et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemistry & Molecular Biology

Additivity in protein-DNA interactions: how good an approximation is it?

PV Benos et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Is there a code for protein-DNA recognition? Probab(ilistical)ly ...

PV Benos et al.

BIOESSAYS (2002)

Article Multidisciplinary Sciences

Exploring the DNA-binding specificities of zinc fingers with DNA microarrays

ML Bulyk et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Multidisciplinary Sciences

Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding

KS Gajiwala et al.

NATURE (2000)