Related references
Note: Only part of the references are listed.High-resolution DNA-binding specificity analysis of yeast transcription factors
Cong Zhu et al.
GENOME RESEARCH (2009)
UniPROBE: an online database of protein binding microarray data on protein-DNA interactions
Daniel E. Newburger et al.
NUCLEIC ACIDS RESEARCH (2009)
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
Michael F. Berger et al.
CELL (2008)
Predicting expression patterns from regulatory sequence in Drosophila segmentation
Eran Segal et al.
NATURE (2008)
Novel repressor of the human FMR1 gene -: identification of p56 human (GCC)n-binding protein as a Kruppel-like transcription factor ZF5
Sergey V. Orlov et al.
FEBS JOURNAL (2007)
Bcl-6 mediates the germinal center B cell phenotype and lymphomagenesis through transcriptional repression of the DNA-damage sensor ATR
Stella Maris Ranuncolo et al.
NATURE IMMUNOLOGY (2007)
RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors
Xiaoyu Chen et al.
BIOINFORMATICS (2007)
A systems approach to measuring the binding energy landscapes of transcription factors
Sebastian J. Maerkl et al.
SCIENCE (2007)
Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities
Michael F. Berger et al.
NATURE BIOTECHNOLOGY (2006)
Extensive low-affinity transcriptional interactions in the yeast genome
Amos Tanay
GENOME RESEARCH (2006)
TRANSFAC (R) and its module TRANSCompel (R): transcriptional gene regulation in eukaryotes
V. Matys et al.
NUCLEIC ACIDS RESEARCH (2006)
MAGIC, an in vivo genetic method for the rapid construction of recombinant DNA molecules
MZ Li et al.
NATURE GENETICS (2005)
Explicit equilibrium modeling of transcription-factor binding and gene regulation
JA Granek et al.
GENOME BIOLOGY (2005)
Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays
S Mukherjee et al.
NATURE GENETICS (2004)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Multiple sequence alignment with the Clustal series of programs
R Chenna et al.
NUCLEIC ACIDS RESEARCH (2003)
Additivity in protein-DNA interactions: how good an approximation is it?
PV Benos et al.
NUCLEIC ACIDS RESEARCH (2002)
Is there a code for protein-DNA recognition? Probab(ilistical)ly ...
PV Benos et al.
BIOESSAYS (2002)
Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors
ML Bulyk et al.
NUCLEIC ACIDS RESEARCH (2002)
Exploring the DNA-binding specificities of zinc fingers with DNA microarrays
ML Bulyk et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Non-independence of Mnt repressor-operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay
TK Man et al.
NUCLEIC ACIDS RESEARCH (2001)
Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding
KS Gajiwala et al.
NATURE (2000)