4.1 Article

QSAR MODELING: A NEW OPEN SOURCE COMPUTATIONAL PACKAGE TO GENERATE AND VALIDATE QSAR MODELS

Journal

QUIMICA NOVA
Volume 36, Issue 4, Pages 554-U250

Publisher

SOC BRASILEIRA QUIMICA
DOI: 10.1590/S0100-40422013000400013

Keywords

QSAR models; OPS variable selection; outlier detection

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QSAR modeling is a novel computer program developed to generate and validate QSAR or QSPR (quantitative structure- activity or property relationships) models. With QSAR modeling, users can build partial least squares (PLS) regression models, perform variable selection with the ordered predictors selection (OPS) algorithm, and validate models by using y-randomization and leave-N-out cross validation. An additional new feature is outlier detection carried out by simultaneous comparison of sample leverage with the respective Studentized residuals. The program was developed using Java version 6, and runs on any operating system that supports Java Runtime Environment version 6. The use of the program is illustrated. This program is available for download at lqta.iqm.unicamp.br.

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