Related references
Note: Only part of the references are listed.Functional Conservation of Both CDS- and 3'-UTR-Located MicroRNA Binding Sites between Species
Guojing Liu et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions
Ioannis S. Vlachos et al.
NUCLEIC ACIDS RESEARCH (2015)
The UCSC Genome Browser database: 2015 update
Kate R. Rosenbloom et al.
NUCLEIC ACIDS RESEARCH (2015)
Ensembl 2015
Fiona Cunningham et al.
NUCLEIC ACIDS RESEARCH (2015)
The functional BRCA1 rs799917 genetic polymorphism is associated with gastric cancer risk in a Chinese Han population
Kun Wang et al.
TUMOR BIOLOGY (2015)
mRNA Destabilization Is the Dominant Effect of Mammalian MicroRNAs by the Time Substantial Repression Ensues
Stephen W. Eichhorn et al.
MOLECULAR CELL (2014)
starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data
Jun-Hao Li et al.
NUCLEIC ACIDS RESEARCH (2014)
miRBase: annotating high confidence microRNAs using deep sequencing data
Ana Kozomara et al.
NUCLEIC ACIDS RESEARCH (2014)
The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
Danielle Welter et al.
NUCLEIC ACIDS RESEARCH (2014)
STarMir: a web server for prediction of microRNA binding sites
William Rennie et al.
NUCLEIC ACIDS RESEARCH (2014)
Analysis of CDS-located miRNA target sites suggests that they can effectively inhibit translation
Jean Hausser et al.
GENOME RESEARCH (2013)
Transgenic Expression of MicroRNA-185 Causes a Developmental Arrest of T Cells by Targeting Multiple Genes Including Mzb1
Serkan Belkaya et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows
Maria D. Paraskevopoulou et al.
NUCLEIC ACIDS RESEARCH (2013)
Unusually effective microRNA targeting within repeat-rich coding regions of mammalian mRNAs
Michael Schnall-Levin et al.
GENOME RESEARCH (2011)
Molecular Characterization of the MicroRNA-138-Fos-like Antigen 1 (FOSL1) Regulatory Module in Squamous Cell Carcinoma
Yi Jin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
miRWalk - Database: Prediction of possible miRNA binding sites by walking the genes of three genomes
Harsh Dweep et al.
JOURNAL OF BIOMEDICAL INFORMATICS (2011)
starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
Jian-Hua Yang et al.
NUCLEIC ACIDS RESEARCH (2011)
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Likun Wang et al.
BIOINFORMATICS (2010)
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
Markus Hafner et al.
CELL (2010)
MicroRNAs Regulate Human Hepatocyte Nuclear Factor 4α, Modulating the Expression of Metabolic Enzymes and Cell Cycle
Shingo Takagi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
Huaiyu Mi et al.
NUCLEIC ACIDS RESEARCH (2010)
Mechanism of translational regulation by miR-2 from sites in the 5′ untranslated region or the open reading frame
Francesca Moretti et al.
RNA (2010)
MicroRNAs: Target Recognition and Regulatory Functions
David P. Bartel
CELL (2009)
Abundant conserved microRNA target sites in the 5'-untranslated region and coding sequence
Xue Zhou et al.
GENETICA (2009)
New class of microRNA targets containing simultaneous 5′-UTR and 3′-UTR interaction sites
Inhan Lee et al.
GENOME RESEARCH (2009)
A novel microRNA targeting HDAC5 regulates osteoblast differentiation in mice and contributes to primary osteoporosis in humans
Hui Li et al.
JOURNAL OF CLINICAL INVESTIGATION (2009)
CRD-BP Protects the Coding Region of βTrCP1 mRNA from miR-183-Mediated Degradation
Irina Elcheva et al.
MOLECULAR CELL (2009)
Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
Sung Wook Chi et al.
NATURE (2009)
miRecords: an integrated resource for microRNA-target interactions
Feifei Xiao et al.
NUCLEIC ACIDS RESEARCH (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
MicroRNA-10a binds the 5′UTR of ribosomal protein mRNAs and enhances their translation
Ulf Andersson Orom et al.
MOLECULAR CELL (2008)
Widespread changes in protein synthesis induced by microRNAs
Matthias Selbach et al.
NATURE (2008)
MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation
Yvonne Tay et al.
NATURE (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence
Joshua J. Forman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
GEOquery: a bridge between the gene expression omnibus (GEO) and BioConductor
Davis Sean et al.
BIOINFORMATICS (2007)
A mammalian microRNA expression atlas based on small RNA library sequencing
Pablo Landgraf et al.
CELL (2007)
A pattern-based method for the identification of microRNA binding sites and their corresponding heteroduplexes
Kevin C. Miranda et al.
CELL (2006)
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
A Siepel et al.
GENOME RESEARCH (2005)
SNPs in ecology, evolution and conservation
PA Morin et al.
TRENDS IN ECOLOGY & EVOLUTION (2004)
Fast and effective prediction of microRNA/target duplexes
M Rehmsmeier et al.
RNA (2004)
Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
R Edgar et al.
NUCLEIC ACIDS RESEARCH (2002)