4.3 Article

Effect of mixed macromolecular crowding agents on protein folding

Journal

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 72, Issue 4, Pages 1109-1113

Publisher

WILEY-BLACKWELL
DOI: 10.1002/prot.22111

Keywords

excluded-volume effect; folding stability; folding rate

Funding

  1. NIH [GM058187]
  2. NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES [R01GM058187] Funding Source: NIH RePORTER

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In cells, proteins fold and unfold in the presence of macromolecules with various sizes and shapes. Recent experiments by Liang and coworkers (J Biol Chem 2004,279.55109-55116, J Mol Biol 2006,364:469-482) show that protein refolding is enhanced by a mixture of two different crowding agents relative to tire individual crowding agents and an optimal mixing ratio exists. Here, we present a theory that predicts tire existence Of an optimal mixing ratio. The theory is based on models for calculating tire changes in tire chemical potentials of the folded and unfolded states by a mixture of crowders. The existence of air optimal mixing ratio results from tire dependences of these chemical-potential changes on crowder sizes and concentrations, which can be argued to be quite general. We further predict that, for any crowding agent, the stabilizing effect can be optimized both by varying the molecular weight and tire mixing ratio of two species with different molecular weights.

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