Related references
Note: Only part of the references are listed.MoRFpred, a computational tool for sequence-based prediction and characterization of short disorder-to-order transitioning binding regions in proteins
Fatemeh Miri Disfani et al.
BIOINFORMATICS (2012)
Attributes of short linear motifs
Norman E. Davey et al.
MOLECULAR BIOSYSTEMS (2012)
Tissue-Specific Alternative Splicing Remodels Protein-Protein Interaction Networks
Jonathan D. Ellis et al.
MOLECULAR CELL (2012)
Tissue-Specific Splicing of Disordered Segments that Embed Binding Motifs Rewires Protein Interaction Networks
Marija Buljan et al.
MOLECULAR CELL (2012)
ELM-the database of eukaryotic linear motifs
Holger Dinkel et al.
NUCLEIC ACIDS RESEARCH (2012)
Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences
Tian Mi et al.
NUCLEIC ACIDS RESEARCH (2012)
Protein Coadaptation and the Design of Novel Approaches to Identify Protein-Protein Interactions
Mario A. Fares et al.
IUBMB LIFE (2011)
The multiple-specificity landscape of modular peptide recognition domains
David Gfeller et al.
MOLECULAR SYSTEMS BIOLOGY (2011)
Understanding protein non-folding
Vladimir N. Uversky et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2010)
Hub Promiscuity in Protein-Protein Interaction Networks
Ashwini Patil et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2010)
Musite, a Tool for Global Prediction of General and Kinase-specific Phosphorylation Sites
Jianjiong Gao et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
ELM: the status of the 2010 eukaryotic linear motif resource
Cathryn M. Gould et al.
NUCLEIC ACIDS RESEARCH (2010)
Domain distribution and intrinsic disorder in hubs in the human protein-protein interaction network
Ashwini Patil et al.
PROTEIN SCIENCE (2010)
ANCHOR: web server for predicting protein binding regions in disordered proteins
Zsuzsanna Dosztanyi et al.
BIOINFORMATICS (2009)
Exploring the evolutionary rate differences of party hub and date hub proteins in Saccharomyces cerevisiae protein-protein interaction network
Bratati Kahali et al.
GENE (2009)
Evolutionary constraints on hub and non-hub proteins in human protein interaction network: Insight from protein connectivity and intrinsic disorder
Baisali Manna et al.
GENE (2009)
Protein-protein crystal-packing contacts
Oliviero Carugo et al.
PROTEIN SCIENCE (2009)
Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners
Christopher J. Oldfield et al.
BMC GENOMICS (2008)
A protein domain-based interactome network for C-elegans early embryogenesis
Mike Boxem et al.
CELL (2008)
Understanding eukaryotic linear motifs and their role in cell signaling and regulation
Francesca Diella et al.
FRONTIERS IN BIOSCIENCE-LANDMARK (2008)
Viral infection and human disease - insights from minimotifs
Krishna Kadaveru et al.
FRONTIERS IN BIOSCIENCE (2008)
The role of disorder in interaction networks: a structural analysis
Philip M. Kim et al.
MOLECULAR SYSTEMS BIOLOGY (2008)
Identification of a potent synthetic FXR agonist with an unexpected mode of binding and activation
Stephen M. Soisson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Identification of transient hub proteins and the possible structural basis for their multiple interactions
Miho Higurashi et al.
PROTEIN SCIENCE (2008)
Quantitative assessment of the structural bias in protein-protein interaction assays
Asa K. Bjorklund et al.
PROTEOMICS (2008)
Mining α-helix-forming molecular recognition features with cross species sequence alignments
Yugong Cheng et al.
BIOCHEMISTRY (2007)
The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2
Santiago Ramon-Maiques et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins
Richard J. Edwards et al.
PLOS ONE (2007)
Intrinsic disorder in yeast transcriptional regulatory network
Gajinder Pal Singh et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA
Steen K. T. Ooi et al.
NATURE (2007)
Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase
Jean-Francois Couture et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)
Structural basis of LSD1-CoREST selectivity in histone H3 recognition
Federico Forneris et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Local structural disorder imparts plasticity on linear motifs
Monika Fuxreiter et al.
BIOINFORMATICS (2007)
Role of intrinsic disorder in transient interactions of hub proteins
Gajinder Pal Singh et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
Crystal structure of the PXR-T1317 complex provides a scaffold to examine the potential for receptor antagonism
Yu Xue et al.
BIOORGANIC & MEDICINAL CHEMISTRY (2007)
Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions
Hongbo Xie et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins
Hongbo Xie et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Functional anthology of intrinsic disorder. 2. Cellular components, domains, technical terms, developmental processes, and coding sequence diversities correlated with long disordered regions
Slobodan Vucetic et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1
Yan Zhang et al.
MOLECULAR CELL (2006)
Disorder and sequence repeats in hub proteins and their implications for network evolution
Zsuzsanna Dosztanyi et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Analysis of molecular recognition features (MoRFs)
Amrita Mohan et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex
Alexander J. Ruthenburg et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)
Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes
Chad Haynes et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms
Pedro R. Romero et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A
Y Huang et al.
SCIENCE (2006)
Disordered domains and high surface charge confer hubs with the ability to interact with multiple proteins in interaction networks
A Patil et al.
FEBS LETTERS (2006)
SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent
Norman E. Davey et al.
NUCLEIC ACIDS RESEARCH (2006)
What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?
Diana Ekman et al.
GENOME BIOLOGY (2006)
Molecular basis for the recognition of phosphorylated and phosphoacetylated histone H3 by 14-3-3
N MacDonald et al.
MOLECULAR CELL (2005)
Flexible nets - The roles of intrinsic disorder in protein interaction networks
AK Dunker et al.
FEBS JOURNAL (2005)
Coupled folding and binding with α-helix-forming molecular recognition elements
CJ Oldfield et al.
BIOCHEMISTRY (2005)
The molecular mechanisms of coactivator utilization in ligand-dependent transactivation by the androgen receptor
E Estébanez-Perpiña et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Intrinsically unstructured proteins and their functions
HJ Dyson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)
Analysis of the requirement for RNA polymerase IICTD heptapeptide repeats in pre-mRNA splicing and 3′-end cleavage
E Rosonina et al.
RNA (2004)
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
JJ Ward et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
The C-terminal domain of measles virus nucleoprotein belongs to the class of intrinsically disordered proteins that fold upon binding to their physiological partner
JM Bourhis et al.
VIRUS RESEARCH (2004)
Network biology:: Understanding the cell's functional organization
AL Barabási et al.
NATURE REVIEWS GENETICS (2004)
The importance of intrinsic disorder for protein phosphorylation
LM Iakoucheva et al.
NUCLEIC ACIDS RESEARCH (2004)
A structural basis for constitutive activity in the human CAR/RXRα heterodimer
RX Xu et al.
MOLECULAR CELL (2004)
Studies of the RNA degradosome-organizing domain of the Escherichia coli ribonuclease RNase E
AJ Callaghan et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
Recognition of RNA polymerase II carboxy-terminal domain by 3′-RNA-processing factors
A Meinhart et al.
NATURE (2004)
Structural basis for histone and phosphohistone binding by the GCN5 histone acetyltransferase
A Clements et al.
MOLECULAR CELL (2003)
Structural basis for the product specificity of histone lysine methyltransferases
X Zhang et al.
MOLECULAR CELL (2003)
ELM server:: a new resource for investigating short functional sites in modular eukaryotic proteins
P Puntervoll et al.
NUCLEIC ACIDS RESEARCH (2003)
Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs
JC Obenauer et al.
NUCLEIC ACIDS RESEARCH (2003)
Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II
C Fabrega et al.
MOLECULAR CELL (2003)
Antibody multispecificity mediated by conformational diversity
LC James et al.
SCIENCE (2003)
Intrinsically unstructured proteins
P Tompa
TRENDS IN BIOCHEMICAL SCIENCES (2002)
Intrinsic disorder and protein function
AK Dunker et al.
BIOCHEMISTRY (2002)
Lethality and centrality in protein networks
H Jeong et al.
NATURE (2001)
Intrinsically disordered protein
AK Dunker et al.
JOURNAL OF MOLECULAR GRAPHICS & MODELLING (2001)
Share Paper
