Related references
Note: Only part of the references are listed.Molecular Networking and Pattern-Based Genome Mining Improves Discovery of Biosynthetic Gene Clusters and their Products from Salinispora Species
Katherine R. Duncan et al.
CHEMISTRY & BIOLOGY (2015)
The gyrase inhibitor albicidin consists of p-aminobenzoic acids and cyanoalanine
Stephane Cociancich et al.
NATURE CHEMICAL BIOLOGY (2015)
Automated Identification of Depsipeptide Natural Products by an Informatic Search Algorithm
Michael A. Skinnider et al.
CHEMBIOCHEM (2015)
Automated Genome Mining of Ribosomal Peptide Natural Products
Hosein Mohimani et al.
ACS CHEMICAL BIOLOGY (2014)
Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
Peter Cimermancic et al.
CELL (2014)
NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery
Hosein Mohimani et al.
JOURNAL OF NATURAL PRODUCTS (2014)
Pfam: the protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2014)
Structural investigation of ribosomally synthesized natural products by hypothetical structure enumeration and evaluation using tandem MS
Qi Zhang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products
Marnix H. Medema et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Bioinformatic evaluation of the secondary metabolism of antistaphylococcal environmental bacterial isolates
Morgan A. Wyatt et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2013)
Nonribosomal Assembly of Natural Lipocyclocarbamate Lipoprotein-Associated Phospholipase Inhibitors
Chad W. Johnston et al.
CHEMBIOCHEM (2013)
Molecular Networking as a Dereplication Strategy
Jane Y. Yang et al.
JOURNAL OF NATURAL PRODUCTS (2013)
Gold biomineralization by a metallophore from a gold-associated microbe
Chad W. Johnston et al.
NATURE CHEMICAL BIOLOGY (2013)
antiSMASH 2.0-a versatile platform for genome mining of secondary metabolite producers
Kai Blin et al.
NUCLEIC ACIDS RESEARCH (2013)
Classification of the Adenylation and Acyl-Transferase Activity of NRPS and PKS Systems Using Ensembles of Substrate Specific Hidden Markov Models
Barzan I. Khayatt et al.
PLOS ONE (2013)
MS/MS networking guided analysis of molecule and gene cluster families
Don Duy Nguyen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules
Roland D. Kersten et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
JSME: a free molecule editor in JavaScript
Bruno Bienfait et al.
JOURNAL OF CHEMINFORMATICS (2013)
NRPSsp: non-ribosomal peptide synthase substrate predictor
Carlos Prieto et al.
BIOINFORMATICS (2012)
BioJava: an open-source framework for bioinformatics in 2012
Andreas Prlic et al.
BIOINFORMATICS (2012)
Bacterial Biosynthesis and Maturation of the Didemnin Anti-cancer Agents
Ying Xu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
SMART 7: recent updates to the protein domain annotation resource
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2012)
New WS9326A Congeners from Streptomyces sp 9078 Inhibiting Brugia malayi Asparaginyl-tRNA Synthetase
Zhiguo Yu et al.
ORGANIC LETTERS (2012)
Cryptic Polyketide Synthase Genes in Non-Pathogenic Clostridium SPP
Swantje Behnken et al.
PLOS ONE (2012)
Mass spectral molecular networking of living microbial colonies
Jeramie Watrous et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery
Ashraf Ibrahim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Metagenome Mining Reveals Polytheonamides as Posttranslationally Modified Ribosomal Peptides
Michael F. Freeman et al.
SCIENCE (2012)
Biosynthetic Gene Cluster of the Non-ribosomally Synthesized Cyclodepsipeptide Skyllamycin: Deciphering Unprecedented Ways of Unusual Hydroxylation Reactions
Stefan Pohle et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
A mass spectrometry-guided genome mining approach for natural product peptidogenomics
Roland D. Kersten et al.
NATURE CHEMICAL BIOLOGY (2011)
NRPSpredictor2-a web server for predicting NRPS adenylation domain specificity
Marc Roettig et al.
NUCLEIC ACIDS RESEARCH (2011)
antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
Marnix H. Medema et al.
NUCLEIC ACIDS RESEARCH (2011)
HMMER web server: interactive sequence similarity searching
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2011)
Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria
Rodrigo Mendes et al.
SCIENCE (2011)
Natural Products Version 2.0: Connecting Genes to Molecules
Christopher T. Walsh et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
The Biosynthetic Logic of Polyketide Diversity
Christian Hertweck
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2009)
Natural products in crop protection
Franck E. Dayan et al.
BIOORGANIC & MEDICINAL CHEMISTRY (2009)
Automated genome mining for natural products
Michael H. T. Li et al.
BMC BIOINFORMATICS (2009)
ABySS: A parallel assembler for short read sequence data
Jared T. Simpson et al.
GENOME RESEARCH (2009)
Genomic basis for natural product biosynthetic diversity in the actinomycetes
Markus Nett et al.
NATURAL PRODUCT REPORTS (2009)
Dereplication and de novo sequencing of nonribosomal peptides
Julio Ng et al.
NATURE METHODS (2009)
Drug Discovery and Natural Products: End of an Era or an Endless Frontier?
Jesse W. -H. Li et al.
SCIENCE (2009)
Natural-Product Sugar Biosynthesis and Enzymatic Glycodiversification
Christopher J. Thibodeaux et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2008)
In silico analysis of methyltransferase domains involved in biosynthesis of secondary metabolites
Mohd Zeeshan Ansari et al.
BMC BIOINFORMATICS (2008)
Clustering millions of tandem mass spectra
Ari M. Frank et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Nonribosomal peptide synthetases involved in the production of medically relevant natural products
Elizabeth A. Felnagle et al.
MOLECULAR PHARMACEUTICS (2008)
ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures
Antonio Starcevic et al.
NUCLEIC ACIDS RESEARCH (2008)
Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution
Christian Rausch et al.
BMC EVOLUTIONARY BIOLOGY (2007)
Identifying bacterial genes and endosymbiont DNA with Glimmer
Arthur L. Delcher et al.
BIOINFORMATICS (2007)
SmiLib v2.0:: A Java-based tool for rapid combinatorial library enumeration
Andreas Schueller et al.
QSAR & COMBINATORIAL SCIENCE (2007)
Natural products as sources of new drugs over the last 25 years
David J. Newman et al.
JOURNAL OF NATURAL PRODUCTS (2007)
Polyketide synthases and nonribosomal peptide synthetases: the emerging view from bacterial genomics
Stefano Donadio et al.
NATURAL PRODUCT REPORTS (2007)
Assembly-line enzymology for polyketide and nonribosomal peptide antibiotics: Logic, machinery, and mechanisms
Michael A. Fischbach et al.
CHEMICAL REVIEWS (2006)
Deciphering indolocarbazole and enediyne aminodideoxypentose biosynthesis through comparative genomics: Insights from the AT2433 biosynthetic locus
Qunjie Gao et al.
CHEMISTRY & BIOLOGY (2006)
Enzymic activation and transfer of fatty acids as acyl-adenylates in mycobacteria
OA Trivedi et al.
NATURE (2004)
Chalcomycin biosynthesis gene cluster from Streptomyces bikiniensis:: Novel features of an unusual ketolide produced through expression of the chm polyketide synthase in Streptomyces fradiae
SL Ward et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2004)
NMR spectroscopy in the study of carbohydrates: Characterizing the structural complexity
WA Bubb
CONCEPTS IN MAGNETIC RESONANCE PART A (2003)
Antibiotic glycosyltransferases: Antibiotic maturation and prospects for reprogramming
C Walsh et al.
JOURNAL OF MEDICINAL CHEMISTRY (2003)
The Chemistry Development Kit (CDK): An open-source Java library for chemo- and bioinformatics
C Steinbeck et al.
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES (2003)
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
SD Bentley et al.
NATURE (2002)
Involvement of a cytochrome P450 monooxygenase in thaxtomin a biosynthesis by Streptomyces acidiscabies
FG Healy et al.
JOURNAL OF BACTERIOLOGY (2002)
Share Paper
