Related references
Note: Only part of the references are listed.Programming with models: modularity and abstraction provide powerful capabilities for systems biology
Aneil Mallavarapu et al.
JOURNAL OF THE ROYAL SOCIETY INTERFACE (2009)
Exact model reduction of combinatorial reaction networks
Holger Conzelmann et al.
BMC SYSTEMS BIOLOGY (2008)
Domain-oriented reduction of rule-based network models
N. M. Borisov et al.
IET SYSTEMS BIOLOGY (2008)
Modeling networks of coupled enzymatic reactions using the total quasi-steady state approximation
Andrea Ciliberto et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains
NM Borisov et al.
BIOSYSTEMS (2006)
A network model of early events in epidermal growth factor receptor signaling that accounts for combinatorial complexity
ML Blinov et al.
BIOSYSTEMS (2006)
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks
H Conzelmann et al.
BMC BIOINFORMATICS (2006)
Combinatorial complexity and dynamical restriction of network flows in signal transduction
JR Faeder et al.
SYSTEMS BIOLOGY (2005)
Automatic generation of cellular reaction networks with Moleculizer 1.0
L Lok et al.
NATURE BIOTECHNOLOGY (2005)
Formal molecular biology
V Danos et al.
THEORETICAL COMPUTER SCIENCE (2004)
BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains
ML Blinov et al.
BIOINFORMATICS (2004)