4.6 Article

Charged Residues Distribution Modulates Selectivity of the Open State of Human Isoforms of the Voltage Dependent Anion-Selective Channel

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Deletion of β-strands 9 and 10 converts VDAC1 voltage-dependence in an asymmetrical process

Simona Reina et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2013)

Article Biochemistry & Molecular Biology

Molecular origin of VDAC selectivity towards inorganic ions: A combined molecular and Brownian dynamics study

Eva-Maria Krammer et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2013)

Review Biochemistry & Molecular Biology

Is the mitochondrial outermembrane protein VDAC1 therapeutic target for Alzheimer's disease?

P. Hemachandra Reddy

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2013)

Article Biochemistry & Molecular Biology

Modulation of Human Mitochondrial Voltage-dependent Anion Channel 2 (hVDAC-2) Structural Stability by Cysteine-assisted Barrel-lipid Interactions

Svetlana Rajkumar Maurya et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Review Biochemistry & Molecular Biology

VDAC isoforms in mammals

Angela Messina et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)

Review Biochemistry & Molecular Biology

VDAC inhibition by tubulin and its physiological implications

Tatiana K. Rostovtseva et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)

Review Biochemistry & Molecular Biology

VDAC structure, selectivity, and dynamics

Marco Colombini

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)

Article Biochemistry & Molecular Biology

VDAC1 selectively transfers apoptotic Ca2+ signals to mitochondria

D. De Stefani et al.

CELL DEATH AND DIFFERENTIATION (2012)

Review Biochemistry & Molecular Biology

Mitochondrial VDAC1: Function in Cell Life and Death and a Target for Cancer Therapy

V. Shoshan-Barmatz et al.

CURRENT MEDICINAL CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Affixing N-terminal α-Helix to the Wall of the Voltage-dependent Anion Channel Does Not Prevent Its Voltage Gating

Oscar Teijido et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Review Cell Biology

VDAC, a multi-functional mitochondrial protein as a pharmacological target

Varda Shoshan-Barmatz et al.

MITOCHONDRION (2012)

Article Biochemistry & Molecular Biology

β-Barrel Mobility Underlies Closure of the Voltage-Dependent Anion Channel

Ulrich Zachariae et al.

STRUCTURE (2012)

Article Pharmacology & Pharmacy

Warburg Revisited: Regulation of Mitochondrial Metabolism by Voltage-Dependent Anion Channels in Cancer Cells

Eduardo N. Maldonado et al.

JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS (2012)

Article Biophysics

Molecular Dynamics Studies of Ion Permeation in VDAC

Huan Rui et al.

BIOPHYSICAL JOURNAL (2011)

Article Biophysics

Brownian Dynamics Simulations of Ion Transport through the VDAC

Kyu Il Lee et al.

BIOPHYSICAL JOURNAL (2011)

Article Multidisciplinary Sciences

Concentration Dependent Ion Selectivity in VDAC: A Molecular Dynamics Simulation Study

Eva-Maria Krammer et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Complete reconstruction of an enzyme-inhibitor binding process by molecular dynamics simulations

Ignasi Buch et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Chemistry, Multidisciplinary

The Native Conformation of the Human VDAC1 N Terminus

Robert Schneider et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2010)

Article Biochemistry & Molecular Biology

Apoptosis is regulated by the VDAC1 N-terminal region and by VDAC oligomerization: release of cytochrome c, AIF and Smac/Diablo

Varda Shoshan-Barmatz et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2010)

Article Biochemistry & Molecular Biology

Characterization of human VDAC isoforms: A peculiar function for VDAC3?

Vito De Pinto et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2010)

Article Chemistry, Multidisciplinary

Simulaid: A Simulation Facilitator and Analysis Program

Mihaly Mezei

JOURNAL OF COMPUTATIONAL CHEMISTRY (2010)

Article Biochemistry & Molecular Biology

The Electrostatics of VDAC: Implications for Selectivity and Gating

Om P. Choudhary et al.

JOURNAL OF MOLECULAR BIOLOGY (2010)

Article Physics, Condensed Matter

Structural and dynamical properties of the porins OmpF and OmpC: insights from molecular simulations

Amit Kumar et al.

JOURNAL OF PHYSICS-CONDENSED MATTER (2010)

Review Biochemistry & Molecular Biology

VDAC, a multi-functional mitochondrial protein regulating cell life and death

Varda Shoshan-Barmatz et al.

MOLECULAR ASPECTS OF MEDICINE (2010)

Article Multidisciplinary Sciences

Functional dynamics in the voltage-dependent anion channel

Saskia Villinger et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Biochemistry & Molecular Biology

The 3D structures of VDAC represent a native conformation

Sebastian Hiller et al.

TRENDS IN BIOCHEMICAL SCIENCES (2010)

Article Biochemistry & Molecular Biology

Molecular and functional characterization of VDAC2 purified from mammal spermatozoa

Viviana A. Menzel et al.

BIOSCIENCE REPORTS (2009)

Review Biochemistry & Molecular Biology

The role of solution NMR in the structure determinations of VDAC-1 and other membrane proteins

Sebastian Hiller et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2009)

Article Chemistry, Physical

ACEMD: Accelerating Biomolecular Dynamics in the Microsecond Time Scale

M. J. Harvey et al.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2009)

Article Chemistry, Physical

Bad Seeds Sprout Perilous Dynamics: Stochastic Thermostat Induced Trajectory Synchronization in Biomolecules

Daniel J. Sindhikara et al.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2009)

Review Biochemistry & Molecular Biology

The published 3D structure of the VDAC channel: native or not?

Marco Colombini

TRENDS IN BIOCHEMICAL SCIENCES (2009)

Article Biophysics

Structure of the voltage dependent anion channel: state of the art

Vito De Pinto et al.

JOURNAL OF BIOENERGETICS AND BIOMEMBRANES (2008)

Article Multidisciplinary Sciences

Structure of the human voltage-dependent anion channel

Monika Bayrhuber et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

The crystal structure of mouse VDAC1 at 2.3 Å resolution reveals mechanistic insights into metabolite gating

Rachna Ujwal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Solution structure of the integral human membrane protein VDAC-1 in detergent micelles

Sebastian Hiller et al.

SCIENCE (2008)

Article Cell Biology

An N-terminal nucleotide-binding site in VDAC1: Involvement in regulating mitochondrial function

Galit Yehezkel et al.

JOURNAL OF CELLULAR PHYSIOLOGY (2007)

Article Biochemistry & Molecular Biology

PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations

Todd J. Dolinsky et al.

NUCLEIC ACIDS RESEARCH (2007)

Review Chemistry, Multidisciplinary

Scalable molecular dynamics with NAMD

JC Phillips et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)

Review Biochemistry & Molecular Biology

Very fast empirical prediction and rationalization of protein pKa values

H Li et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

Bid, but not Bax, regulates VDAC channels

TK Rostovtseva et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2004)

Article Cell Biology

VDAC: The channel at the interface between mitochondria and the cytosol

M Colombini

MOLECULAR AND CELLULAR BIOCHEMISTRY (2004)

Article Biochemistry & Molecular Biology

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

TJ Dolinsky et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Multidisciplinary Sciences

VDAC2 inhibits BAK activation and mitochondrial apoptosis

EHY Cheng et al.

SCIENCE (2003)

Article Multidisciplinary Sciences

Electrostatics of nanosystems: Application to microtubules and the ribosome

NA Baker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Biochemistry & Molecular Biology

β-Barrel membrane proteins

GE Schulz

CURRENT OPINION IN STRUCTURAL BIOLOGY (2000)