4.6 Article

Marinobacter salarius sp nov and Marinobacter similis sp nov., Isolated from Sea Water

Journal

PLOS ONE
Volume 9, Issue 9, Pages -

Publisher

PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pone.0106514

Keywords

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Funding

  1. Genome Information Upgrading Program of National BioResource Project from the Ministry of Education, Culture, Sports, Science and Technology (MEXT) of Japan
  2. Federal Agency for Science of the Ministry of Education and Science of the Russian Federation [2-2.16]
  3. Russian Foundation for Basic Research
  4. Presidium of the Russian Academy of Sciences [02-04-48211]

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Two non-pigmented, motile, Gram-negative marine bacteria designated R9SW1(T) and A3d10(T) were isolated from sea water samples collected from Chazhma Bay, Gulf of Peter the Great, Sea of Japan, Pacific Ocean, Russia and St. Kilda Beach, Port Phillip Bay, the Tasman Sea, Pacific Ocean, respectively. Both organisms were found to grow between 4 degrees C and 40 degrees C, between pH 6 to 9, and are moderately halophilic, tolerating up to 20% (w/v) NaCl. Both strains were found to be able to degrade Tween 40 and 80, but only strain R9SW1(T) was found to be able to degrade starch. The major fatty acids were characteristic for the genus Marinobacter including C-16:0, C-16:1 omega 7c, C-18:1 omega 9c and C-18:1 omega 7c. The G+C content of the DNA for strains R9SW1(T) and A3d10(T) were determined to be 57.1 mol% and 57.6 mol%, respectively. The two new strains share 97.6% of their 16S rRNA gene sequences, with 82.3% similarity in the average nucleotide identity (ANI), 19.8% similarity in the in silico genome-to-genome distance (GGD), 68.1% similarity in the average amino acid identity (AAI) of all conserved protein-coding genes, and 31 of the Karlin's genomic signature dissimilarity. A phylogenetic analysis showed that R9SW1(T) clusters with M. algicola DG893(T) sharing 99.40%, and A3d10(T) clusters with M. sediminum R65(T) sharing 99.53% of 16S rRNA gene sequence similarities. The results of the genomic and polyphasic taxonomic study, including genomic, genetic, phenotypic, chemotaxonomic and phylogenetic analyses based on the 16S rRNA, gyrB and rpoD gene sequence similarities, the analysis of the protein profiles generated using MALDI-TOF mass spectrometry, and DNA-DNA relatedness data, indicated that strains R9SW1(T) and A3d10(T) represent two novel species of the genus Marinobacter. The names Marinobacter salarius sp. nov., with the type strain R9SW1(T) (= LMG 27497(T) = JCM 19399(T) = CIP 110588(T) = KMM 7502(T)) and Marinobacter similis sp. nov., with the type strain A3d10(T) (= JCM 19398(T) = CIP 110589(T) = KMM 7501(T)), are proposed.

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