4.6 Article

Gene-Wide Analysis Detects Two New Susceptibility Genes for Alzheimer's Disease

Journal

PLOS ONE
Volume 9, Issue 6, Pages -

Publisher

PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pone.0094661

Keywords

-

Funding

  1. French National Foundation
  2. Institut Pasteur de Lille, Inserm, FRC (fondation pour la recherche sur le cerveau) and Rotary
  3. LABEX (laboratory of excellence program investment for the future) DISTALZ grant (Development of Innovative Strategies for a Transdisciplinary approach to ALZheimer's disease)
  4. LABEX GENMED grant (Medical Genomics)
  5. IGAP
  6. National Foundation for Alzheimer's disease and related disorders, the Institut Pasteur de Lille and the Centre National de Genotypage
  7. The Fondation pour la Recherche Medicale
  8. Caisse Nationale Maladie des Travailleurs Salaries, Direction Generale de la Sante, MGEN, Institut de la Longevite, Agence Francaise, de Securite Sanitaire des Produits de Sante
  9. ANR
  10. Eisai
  11. Belgian Science Policy Office Interuniversity Attraction Poles program
  12. Foundation Alzheimer Research (SAO-FRA)
  13. Flemish Government initiated Methusalem Excellence Program
  14. Research Foundation Flanders (FWO)
  15. University of Antwerp Research Fund, Belgium
  16. Health Research Council of the Academy of Finland
  17. Kuopio University Hospital [5772708]
  18. Nordic Centre of Excellence in Neurodegeneration
  19. Cassa di Risparmio di Pistoia e Pescia [2012]
  20. Cassa di Risparmio di Firenze [2012]
  21. Stichting MS Research
  22. Brain Net Europe
  23. Hersenstichting Nederland Breinbrekend Werk
  24. International Parkinson Fonds, Internationale Stiching Alzheimer Onderzoek
  25. Institut de Neuropatologia, Servei Anatomia Patologica, Universitat de Barcelona
  26. ADNI
  27. Abbott
  28. AstraZeneca AB
  29. Bayer Schering Pharma AG
  30. Bristol-Myers Squibb
  31. Eisai Global Clinical Development
  32. Elan Corporation
  33. Genentech
  34. GE Healthcare
  35. Glaxo-SmithKline
  36. Innogenetics
  37. Johnson and Johnson
  38. Eli Lilly and Co
  39. Medpace, Inc
  40. Merck and Co., Inc.
  41. Novartis AG
  42. Pfizer Inc
  43. F. Hoffman-La Roche
  44. Schering-Plough
  45. Synarc, Inc.
  46. Alzheimer's Association
  47. Alzheimer's Drug Discovery Foundation
  48. Dana Foundation
  49. National Institute of Biomedical Imaging and Bioengineering
  50. NIA [U01 AG024904, RC2 AG036535, K01 AG030514]
  51. ADNI (National Institutes of Health) [U01 AG024904]
  52. National Institute on Aging
  53. The Canadian Institutes of Health Research
  54. NIH [K01 AG030514, P30 AG010129]
  55. Alzheimer Association (LAF) [IIRG-08-89720]
  56. Alzheimer Association (MP-V) [IIRG-05-14147]
  57. United States Department of Veterans Affairs Administration, Office of Research and Development, Biomedical Laboratory Research Program
  58. Wellcome Trust
  59. Howard Hughes Medical Institute
  60. Canadian Institute of Health
  61. LABEX
  62. CNG
  63. EADI
  64. Aquitaine and Bourgogne Regional Councils, Agence Nationale de la Recherche
  65. [RF-2010-2319722]
  66. Alzheimers Research UK [ARUK-PG2014-2, ARUK-PG2014-1, ARUK-NCG2014A-1, ART-BIG2009-1] Funding Source: researchfish
  67. Alzheimer's Society [167, 164] Funding Source: researchfish
  68. Medical Research Council [MR/K013041/1, MR/L501517/1, MC_U123160651, MC_U137686857, G0902227, MR/L010305/1, MC_PC_14095, MC_U123192748] Funding Source: researchfish
  69. National Institute for Health Research [NF-SI-0611-10084, NF-SI-0512-10053, NF-SI-0513-10134, NF-SI-0508-10123] Funding Source: researchfish
  70. MRC [G0902227, MC_U123192748, MR/K013041/1, MC_U123160651, MC_U137686857, MC_PC_14095] Funding Source: UKRI

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Background: Alzheimer's disease is a common debilitating dementia with known heritability, for which 20 late onset susceptibility loci have been identified, but more remain to be discovered. This study sought to identify new susceptibility genes, using an alternative gene-wide analytical approach which tests for patterns of association within genes, in the powerful genome-wide association dataset of the International Genomics of Alzheimer's Project Consortium, comprising over 7 m genotypes from 25,580 Alzheimer's cases and 48,466 controls. Principal Findings: In addition to earlier reported genes, we detected genome-wide significant loci on chromosomes 8 (TP53INP1, p = 1.4x10(-6)) and 14 (IGHV1-67 p = 7.9x10(-8)) which indexed novel susceptibility loci. Significance: The additional genes identified in this study, have an array of functions previously implicated in Alzheimer's disease, including aspects of energy metabolism, protein degradation and the immune system and add further weight to these pathways as potential therapeutic targets in Alzheimer's disease.

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