Related references
Note: Only part of the references are listed.Integrated genomic characterization of endometrial carcinoma
Gad Getz et al.
NATURE (2013)
Rfam 11.0: 10 years of RNA families
Sarah W. Burge et al.
NUCLEIC ACIDS RESEARCH (2013)
miRcode: a map of putative microRNA target sites in the long non-coding transcriptome
Ashwini Jeggari et al.
BIOINFORMATICS (2012)
Global transcriptome analysis reveals distinct expression among duplicated genes during sorghum-interaction
Hiroshi Mizuno et al.
BMC PLANT BIOLOGY (2012)
Long noncoding RNAs are rarely translated in two human cell lines
Balazs Banfai et al.
GENOME RESEARCH (2012)
Extensive somatic L1 retrotransposition in colorectal tumors
Szilvia Solyom et al.
GENOME RESEARCH (2012)
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
Thomas Derrien et al.
GENOME RESEARCH (2012)
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow et al.
GENOME RESEARCH (2012)
LincRNA-p21 Suppresses Target mRNA Translation
Je-Hyun Yoon et al.
MOLECULAR CELL (2012)
Comprehensive molecular characterization of human colon and rectal cancer
Donna M. Muzny et al.
NATURE (2012)
Landscape of transcription in human cells
Sarah Djebali et al.
NATURE (2012)
Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes
Jan J. Molenaar et al.
NATURE (2012)
Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers
Alayne L. Brunner et al.
GENOME BIOLOGY (2012)
The Non-Coding Oncogene: A Case of Missing DNA Evidence?
Puja Shahrouki et al.
Frontiers in Genetics (2012)
PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions
Michael F. Lin et al.
BIOINFORMATICS (2011)
A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA
Marcella Cesana et al.
CELL (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
Filamin A mediates HGF/c-MET signaling in tumor cell migration
Alex-Xianghua Zhou et al.
INTERNATIONAL JOURNAL OF CANCER (2011)
lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements
Chenguang Gong et al.
NATURE (2011)
Integrated genomic analyses of ovarian carcinoma
D. Bell et al.
NATURE (2011)
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
John R. Prensner et al.
NATURE BIOTECHNOLOGY (2011)
Non-coding RNAs in human disease
Manel Esteller
NATURE REVIEWS GENETICS (2011)
Human Cancer Long Non-Coding RNA Transcriptomes
Ewan A. Gibb et al.
PLOS ONE (2011)
A User's Guide to the Encyclopedia of DNA Elements (ENCODE)
Richard M. Myers et al.
PLOS BIOLOGY (2011)
Ovarian Cancer Development and Metastasis
Ernst Langyel
AMERICAN JOURNAL OF PATHOLOGY (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Identification of differentially expressed genes using an annealing control primer system in stage III serous ovarian carcinoma
Yun-Sook Kim et al.
BMC CANCER (2010)
Recurrent Focal Copy-Number Changes and Loss of Heterozygosity Implicate Two Noncoding RNAs and One Tumor Suppressor Gene at Chromosome 3q13.31 in Osteosarcoma
Ivan Pasic et al.
CANCER RESEARCH (2010)
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
Rajnish A. Gupta et al.
NATURE (2010)
The landscape of somatic copy-number alteration across human cancers
Rameen Beroukhim et al.
NATURE (2010)
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
Mitchell Guttman et al.
NATURE BIOTECHNOLOGY (2010)
CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer
Jiayi Wang et al.
NUCLEIC ACIDS RESEARCH (2010)
Novel Primate-Specific Genes, RMEL 1, 2 and 3, with Highly Restricted Expression in Melanoma, Assessed by New Data Mining Tool
Josane F. Sousa et al.
PLOS ONE (2010)
Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells
Jameelah Sheik Mohamed et al.
RNA (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
An Architectural Role for a Nuclear Noncoding RNA: NEAT1 RNA Is Essential for the Structure of Paraspeckles
Christine M. Clemson et al.
MOLECULAR CELL (2009)
Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome
Richard W. Tothill et al.
CLINICAL CANCER RESEARCH (2008)
UCA1, a non-protein-coding RNA up-regulated in bladder carcinoma and embryo, influencing cell growth and promoting invasion
Fan Wang et al.
FEBS LETTERS (2008)
The identification of microRNAs in a genomically unstable region of human chromosome 8q24
Konrad Huppi et al.
MOLECULAR CANCER RESEARCH (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
Pvt1-encoded microRNAs in oncogenesis
Gabriele B. Beck-Engeser et al.
RETROVIROLOGY (2008)
Amplification of PVT1 contributes to the pathophysiology of ovarian and breast cancer
Yinghui Guan et al.
CLINICAL CANCER RESEARCH (2007)
Target mimicry provides a new mechanism for regulation of microRNA activity
Jose Manuel Franco-Zorrilla et al.
NATURE GENETICS (2007)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
NUCLEIC ACIDS RESEARCH (2007)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The transcriptional landscape of the mammalian genome
P Carninci et al.
SCIENCE (2005)
MALAT-1, a novel noncoding RNA, and thymosin β4 predict metastasis and survival in early-stage non-small cell lung cancer
P Ji et al.
ONCOGENE (2003)