4.6 Article

Intestinal Microbiota Composition of Interleukin-10 Deficient C57BL/6J Mice and Susceptibility to Helicobacter hepaticus-Induced Colitis

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Species Composition of Bacteroidales Order Bacteria in the Feces of Healthy People of Various Ages

Elena V. Kulagina et al.

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2012)

Article Gastroenterology & Hepatology

Strain-specific colitis susceptibility in IL10-deficient mice depends on complex gut microbiota-host interactions

Gwen Buechler et al.

INFLAMMATORY BOWEL DISEASES (2012)

Article Multidisciplinary Sciences

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower et al.

NATURE (2012)

Article Multidisciplinary Sciences

Infection-induced colitis in mice causes dynamic and tissue-specific changes in stress response and DNA damage leading to colon cancer

Aswin Mangerich et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemical Research Methods

UCHIME improves sensitivity and speed of chimera detection

Robert C. Edgar et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

NLRP6 Inflammasome Regulates Colonic Microbial Ecology and Risk for Colitis

Eran Elinav et al.

Article Gastroenterology & Hepatology

Global and Deep Molecular Analysis of Microbiota Signatures in Fecal Samples From Patients With Irritable Bowel Syndrome

Mirjana Rajilic-Stojanovic et al.

GASTROENTEROLOGY (2011)

Article Biochemistry & Molecular Biology

ESPRIT-Tree: hierarchical clustering analysis of millions of 16S rRNA pyrosequences in quasilinear computational time

Yunpeng Cai et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies

Patrick D. Schloss et al.

PLOS ONE (2011)

Article Gastroenterology & Hepatology

Human-derived probiotic Lactobacillus reuteri strains differentially reduce intestinal inflammation

Yuying Liu et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2010)

Review Microbiology

The impact of the microbiota on the pathogenesis of IBD: lessons from mouse infection models

Sandra Nell et al.

NATURE REVIEWS MICROBIOLOGY (2010)

Article Multidisciplinary Sciences

Site and Strain-Specific Variation in Gut Microbiota Profiles and Metabolism in Experimental Mice

Melissa K. Friswell et al.

PLOS ONE (2010)

Article Multidisciplinary Sciences

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

Andrew K. Benson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemistry & Molecular Biology

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

Howard Ochman et al.

PLOS BIOLOGY (2010)

Article Multidisciplinary Sciences

A core gut microbiome in obese and lean twins

Peter J. Turnbaugh et al.

NATURE (2009)

Article Multidisciplinary Sciences

A High-Throughput DNA Sequence Aligner for Microbial Ecology Studies

Patrick D. Schloss

PLOS ONE (2009)

Article Biochemical Research Methods

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

James Robert White et al.

PLOS COMPUTATIONAL BIOLOGY (2009)

Article Microbiology

Intestinal TM7 bacterial phylogenies in active inflammatory bowel disease

Tanja Kuehbacher et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2008)

Article Multidisciplinary Sciences

A microbial symbiosis factor prevents intestinal inflammatory disease

Sarkis K. Mazmanian et al.

NATURE (2008)

Article Biochemistry & Molecular Biology

SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Elmar Pruesse et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Communicable ulcerative colitis induced by T-bet deficiency in the innate immune system

Wendy S. Garrett et al.

Article Multidisciplinary Sciences

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases

Daniel N. Frank et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biotechnology & Applied Microbiology

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Qiong Wang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Diversity of the human intestinal microbial flora

PB Eckburg et al.

SCIENCE (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Multidisciplinary Sciences

Induction of colitis by a CD4+ T cell clone specific for a bacterial epitope

MC Kullberg et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Multidisciplinary Sciences

The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus

S Suerbaum et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Immunology

CD4+CD25+ TR cells suppress innate immune pathology through cytokine-dependent mechanisms

KJ Maloy et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2003)

Article Immunology

Bacteria-triggered CD4+ T regulatory cells suppress Helicobacter hepaticus-induced colitis

MC Kullberg et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2002)

Article Biochemistry & Molecular Biology

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

K Katoh et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Microbiology

Study of murine faecal microflora by cellular fatty acid analysis; effect of age and mouse strain

J Vaahtovuo et al.

ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2001)

Article Microbiology

Fluorogenic PCR-based quantitative detection of a murine pathogen, Helicobacter hepaticus

ZM Ge et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2001)

Article Biochemical Research Methods

A greedy algorithm for aligning DNA sequences

Z Zhang et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2000)