4.6 Article

Mechanistic Model of Rothia mucilaginosa Adaptation toward Persistence in the CF Lung, Based on a Genome Reconstructed from Metagenomic Data

Related references

Note: Only part of the references are listed.
Article Respiratory System

Metagenomics and metatranscriptomics: Windows on CF-associated viral and microbial communities

Yan Wei Lim et al.

JOURNAL OF CYSTIC FIBROSIS (2013)

Article Biochemistry & Molecular Biology

Case Studies of the Spatial Heterogeneity of DNA Viruses in the Cystic Fibrosis Lung

Dana Willner et al.

AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY (2012)

Article Multidisciplinary Sciences

An rhs gene of Pseudomonas aeruginosa encodes a virulence protein that activates the inflammasome

Vanderlene L. Kung et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-airway specimens can misrepresent lung microbiota

Amanda F. Goddard et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

Vaughn Iverson et al.

SCIENCE (2012)

Article Biochemical Research Methods

Quality control and preprocessing of metagenomic datasets

Robert Schmieder et al.

BIOINFORMATICS (2011)

Editorial Material Microbiology

DMS3-42: the Secret to CRISPR-Dependent Biofilm Inhibition in Pseudomonas aeruginosa

Kelli L. Palmer et al.

JOURNAL OF BACTERIOLOGY (2011)

Article Respiratory System

Lactate in cystic fibrosis sputum

Tobias Bensel et al.

JOURNAL OF CYSTIC FIBROSIS (2011)

Article Genetics & Heredity

Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes

Tami D. Lieberman et al.

NATURE GENETICS (2011)

Article Multidisciplinary Sciences

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

Robert Schmieder et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity

Dana Willner et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biotechnology & Applied Microbiology

Identifying Active Phage Lysins through Functional Viral Metagenomics

Jonathan E. Schmitz et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Oral Bacteria as Potential Probiotics for the Pharyngeal Mucosa

Simone Guglielmetti et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)

Review Microbiology

The Changing Microbial Epidemiology in Cystic Fibrosis

John J. LiPuma

CLINICAL MICROBIOLOGY REVIEWS (2010)

Review Microbiology

Adaptation of Staphylococcus aureus to the cystic fibrosis lung

Christiane Goerke et al.

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2010)

Article Multidisciplinary Sciences

Viruses in the faecal microbiota of monozygotic twins and their mothers

Alejandro Reyes et al.

NATURE (2010)

Article Multidisciplinary Sciences

Airway Microbiota and Pathogen Abundance in Age-Stratified Cystic Fibrosis Patients

Michael J. Cox et al.

PLOS ONE (2010)

Article Microbiology

Respiratory disease and the role of oral bacteria

Isaac S. Gomes-Filho et al.

Journal of Oral Microbiology (2010)

Article Gastroenterology & Hepatology

Proximal Small Intestinal Microbiota and Identification of Rod-Shaped Bacteria Associated With Childhood Celiac Disease

Gangwei Ou et al.

AMERICAN JOURNAL OF GASTROENTEROLOGY (2009)

Article Biotechnology & Applied Microbiology

Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement

Andrew P. Jackson et al.

BMC GENOMICS (2009)

Article Infectious Diseases

Diversity and site-specificity of the oral microflora in the elderly

D. Preza et al.

EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2009)

Article Critical Care Medicine

Detection of anaerobic bacteria in high numbers in sputum from patients with cystic fibrosis

Michael M. Tunney et al.

AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE (2008)

Article Biotechnology & Applied Microbiology

The RAST server: Rapid annotations using subsystems technology

Ramy K. Aziz et al.

BMC GENOMICS (2008)

Article Multidisciplinary Sciences

Redox-active antibiotics control gene expression and community behavior in divergent bacteria

Lars E. P. Dietrich et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

Molecular identification of bacteria in bronchoalveolar lavage fluid from children with cystic fibrosis

J. Kirk Harris et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

Ibtissem Grissa et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Modulator of drug activity B from Escherichia coli:: Crystal structure of a prokaryotic homologue of DT-diaphorase

Melanie A. Adams et al.

JOURNAL OF MOLECULAR BIOLOGY (2006)

Article Dentistry, Oral Surgery & Medicine

Evaluation of bacterial nitrate reduction in the human oral cavity

JJ Doel et al.

EUROPEAN JOURNAL OF ORAL SCIENCES (2005)

Article Microbiology

Effect of amoxicillin use on oral microbiota in young children

D Ready et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2004)

Article Biotechnology & Applied Microbiology

Versatile and open software for comparing large genomes

S Kurtz et al.

GENOME BIOLOGY (2004)

Article Multidisciplinary Sciences

Extracellular DNA required for bacterial biofilm formation

CB Whitchurch et al.

SCIENCE (2002)

Review Microbiology

Type I restriction systems: Sophisticated molecular machines (a legacy of Bertani and Weigle)

NE Murray

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2000)