4.6 Article

De Novo Analysis of Transcriptome Dynamics in the Migratory Locust during the Development of Phase Traits

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

RNA-Seq gene expression estimation with read mapping uncertainty

Bo Li et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

Designing deep sequencing experiments: detecting structural variation and estimating transcript abundance

Ali Bashir et al.

BMC GENOMICS (2010)

Article Biotechnology & Applied Microbiology

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery

Thomas L. Parchman et al.

BMC GENOMICS (2010)

Article Biochemistry & Molecular Biology

De novo assembly of human genomes with massively parallel short read sequencing

Ruiqiang Li et al.

GENOME RESEARCH (2010)

Article Multidisciplinary Sciences

The sequence and de novo assembly of the giant panda genome

Ruiqiang Li et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

Genome Sequence of the Pea Aphid Acyrthosiphon pisum

Stephen Richards et al.

PLOS BIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Gene ontology analysis for RNA-seq: accounting for selection bias

Matthew D. Young et al.

GENOME BIOLOGY (2010)

Article Biotechnology & Applied Microbiology

A scaling normalization method for differential expression analysis of RNA-seq data

Mark D. Robinson et al.

GENOME BIOLOGY (2010)

Review Cell Biology

Signaling in Adult Neurogenesis

Hoonkyo Suh et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2009)

Review Genetics & Heredity

Applications of New Sequencing Technologies for Transcriptome Analysis

Olena Morozova et al.

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS (2009)

Article Biochemical Research Methods

SOAP2: an improved ultrafast tool for short read alignment

Ruiqiang Li et al.

BIOINFORMATICS (2009)

Article Biology

Transcript length bias in RNA-seq data confounds systems biology

Alicia Oshlack et al.

BIOLOGY DIRECT (2009)

Review Genetics & Heredity

RNA-Seq: a revolutionary tool for transcriptomics

Zhong Wang et al.

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

InterPro: the integrative protein signature database

Sarah Hunter et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Multidisciplinary Sciences

Serotonin Mediates Behavioral Gregarization Underlying Swarm Formation in Desert Locusts

Michael L. Anstey et al.

SCIENCE (2009)

Article Biotechnology & Applied Microbiology

Characterization and comparative profiling of the small RNA transcriptomes in two phases of locust

Yuanyuan Wei et al.

GENOME BIOLOGY (2009)

Editorial Material Biochemistry & Molecular Biology

Locusts

Stephen J. Simpson et al.

CURRENT BIOLOGY (2008)

Article Biochemistry & Molecular Biology

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

John C. Marioni et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

A site- and time-heterogeneous model of amino acid replacement

Samuel Blanquart et al.

MOLECULAR BIOLOGY AND EVOLUTION (2008)

Article Multidisciplinary Sciences

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

Brian T. Wilhelm et al.

NATURE (2008)

Article Biochemical Research Methods

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Ali Mortazavi et al.

NATURE METHODS (2008)

Review Genetics & Heredity

Steady progress and recent breakthroughs in the accuracy of automated genome annotation

Michael R. Brent

NATURE REVIEWS GENETICS (2008)

Article Multidisciplinary Sciences

The transcriptional landscape of the yeast genome defined by RNA sequencing

Ugrappa Nagalakshmi et al.

SCIENCE (2008)

Article Biochemistry & Molecular Biology

TreeFam: 2008 update

Jue Ruan et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

PAML 4: Phylogenetic analysis by maximum likelihood

Ziheng Yang

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Biotechnology & Applied Microbiology

Reactome: a knowledge base of biologic pathways and processes

Imre Vastrik et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

The Gα12-RGS RhoGEF-RhoA signalling pathway regulates neurotransmitter release in C. elegans

Emma Hiley et al.

EMBO JOURNAL (2006)

Article Multidisciplinary Sciences

Retinoic acid is required early during adult neurogenesis in the dentate gyrus

S Jacobs et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

JZ Zhang et al.

MOLECULAR BIOLOGY AND EVOLUTION (2005)

Review Biochemistry & Molecular Biology

Molecular genetics of autism spectrum disorder

J Veenstra-VanderWeele et al.

MOLECULAR PSYCHIATRY (2004)

Article Multidisciplinary Sciences

The analysis of large-scale gene expression correlated to the phase changes of the migratory locust

L Kang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemical Research Methods

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

T Beissbarth et al.

BIOINFORMATICS (2004)

Article Biochemical Research Methods

BioLayout - an automatic graph layout algorithm for similarity visualization

AJ Enright et al.

BIOINFORMATICS (2001)

Article Biochemistry & Molecular Biology

Endocrine mechanisms controlling body-color polymorphism in locusts

S Tanaka

ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY (2001)

Article Multidisciplinary Sciences

Gregarious behavior in desert locusts is evoked by touching their back legs

SJ Simpson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)