4.7 Article

Mean-field versus stochastic models for transcriptional regulation

Related references

Note: Only part of the references are listed.
Article Biophysics

Reaction coordinates for the flipping of genetic switches

Marco J. Morelli et al.

BIOPHYSICAL JOURNAL (2008)

Article Multidisciplinary Sciences

Compositionality, stochasticity, and cooperativity in dynamic models of gene regulation

Ralf Blossey et al.

HFSP JOURNAL (2008)

Article Physics, Fluids & Plasmas

Stochastic simulations of the repressilator circuit

Adiel Loinger et al.

PHYSICAL REVIEW E (2007)

Article Biology

Dynamic patterns of gene regulation I: Simple two-gene systems

Stefanie Widder et al.

JOURNAL OF THEORETICAL BIOLOGY (2007)

Article Multidisciplinary Sciences

Deterministic characterization of stochastic genetic circuits

Matthew Scott et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Evolutionary Biology

Y-chromosome evidence suggests a common paternal heritage of Austro-Asiatic populations

Vikrant Kumar et al.

BMC EVOLUTIONARY BIOLOGY (2007)

Article Biology

A generalized model of the repressilator

Stefan Mueller et al.

JOURNAL OF MATHEMATICAL BIOLOGY (2006)

Article Physics, Multidisciplinary

Genetic toggle switch without cooperative binding

Azi Lipshtat et al.

PHYSICAL REVIEW LETTERS (2006)

Article Multidisciplinary Sciences

Absolute rate theories of epigenetic stability

AM Walczak et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Review Biology

Models of stochastic gene expression

Johan Paulsson

PHYSICS OF LIFE REVIEWS (2005)

Article Physics, Multidisciplinary

Sampling rare switching events in biochemical networks

RJ Allen et al.

PHYSICAL REVIEW LETTERS (2005)

Article Physics, Multidisciplinary

Enhancement of the stability of genetic switches by overlapping upstream regulatory domains

PB Warren et al.

PHYSICAL REVIEW LETTERS (2004)

Article Multidisciplinary Sciences

Summing up the noise in gene networks

J Paulsson

NATURE (2004)

Article Biophysics

Fluctuations and slow variables in genetic networks

R Bundschuh et al.

BIOPHYSICAL JOURNAL (2003)

Article Biochemistry & Molecular Biology

Evolution of transcription factors and the gene regulatory network in Escherichia coli

MM Babu et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemical Research Methods

Genetic Network Analyzer: qualitative simulation of genetic regulatory networks

H de Jong et al.

BIOINFORMATICS (2003)

Article Multidisciplinary Sciences

Intrinsic and extrinsic contributions to stochasticity in gene expression

PS Swain et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Multidisciplinary Sciences

Stochastic gene expression in a single cell

MB Elowitz et al.

SCIENCE (2002)

Article Chemistry, Physical

Biochemical clocks and molecular noise: Theoretical study of robustness factors

D Gonze et al.

JOURNAL OF CHEMICAL PHYSICS (2002)

Article Multidisciplinary Sciences

Mechanisms of noise-resistance in genetic oscillators

JMG Vilar et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Multidisciplinary Sciences

Robustness of circadian rhythms with respect to molecular noise

D Gonze et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Computer Science, Information Systems

Application of a stochastic name-passing calculus to representation and simulation of molecular processes

C Priami et al.

INFORMATION PROCESSING LETTERS (2001)

Article Multidisciplinary Sciences

Stochastic focusing: Fluctuation-enhanced sensitivity of intracellular regulation

J Paulsson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Article Biology

How to make a Biological Switch

JL Cherry et al.

JOURNAL OF THEORETICAL BIOLOGY (2000)

Article Multidisciplinary Sciences

A synthetic oscillatory network of transcriptional regulators

MB Elowitz et al.

NATURE (2000)