4.7 Article

Nonmonotonic density dependence of the diffusion of DNA fragments in low-salt suspensions

Journal

PHYSICAL REVIEW E
Volume 78, Issue 6, Pages -

Publisher

AMER PHYSICAL SOC
DOI: 10.1103/PhysRevE.78.060401

Keywords

biochemistry; biodiffusion; DNA; molecular biophysics; self-diffusion; suspensions

Funding

  1. Deutsche Forschungsgemeinschaft [SFB-TR6, TP B2]

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The high linear charge density of 20-base-pair oligomers of DNA is shown to lead to a striking nonmonotonic dependence of the long-time self-diffusion on the concentration of DNA in low-salt conditions. This generic nonmonotonic behavior results from the strong coupling between the electrostatic and solvent-mediated hydrodynamic interactions, from the renormalization of these electrostatic interactions at large separations, and specifically from the dominance of the far-field hydrodynamic interactions caused by the strong repulsion between the DNA fragments.

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