Related references
Note: Only part of the references are listed.Genome-scale transcriptional analyses of first-generation interspecific sunflower hybrids reveals broad regulatory compatibility
Heather C. Rowe et al.
BMC GENOMICS (2013)
Transcriptional Dynamics of LTR Retrotransposons in Early Generation and Ancient Sunflower Hybrids
Mark C. Ungerer et al.
GENOME BIOLOGY AND EVOLUTION (2013)
Genomic collinearity and the genetic architecture of floral differences between the homoploid hybrid species Iris nelsonii and one of its progenitors, Iris hexagona
S. J. Taylor et al.
HEREDITY (2013)
Genomic Resources Notes accepted 1 February 2013-31 March 2013
et al.
Molecular Ecology Resources (2013)
Transposable elements and microevolutionary changes in natural populations
Georgi Bonchev et al.
MOLECULAR ECOLOGY RESOURCES (2013)
Genomic islands of divergence are not affected by geography of speciation in sunflowers
S. Renaut et al.
NATURE COMMUNICATIONS (2013)
Recurrent Rearrangement during Adaptive Evolution in an Interspecific Yeast Hybrid Suggests a Model for Rapid Introgression
Barbara Dunn et al.
PLOS GENETICS (2013)
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
Alberto Magi et al.
GENOME BIOLOGY (2013)
The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements
S. Evan Staton et al.
PLANT JOURNAL (2012)
DIFFERENTIAL RESPONSE OF THE HOMOPLOID HYBRID SPECIES IRIS NELSONII (IRIDACEAE) AND ITS PROGENITORS TO ABIOTIC HABITAT CONDITIONS
Sunni J. Taylor et al.
AMERICAN JOURNAL OF BOTANY (2011)
Adaptation to P Element Transposon Invasion in Drosophila melanogaster
Jaspreet S. Khurana et al.
CELL (2011)
Transposable Element Proliferation and Genome Expansion Are Rare in Contemporary Sunflower Hybrid Populations Despite Widespread Transcriptional Activity of LTR Retrotransposons
Takeshi Kawakami et al.
GENOME BIOLOGY AND EVOLUTION (2011)
Hybrid origin of Audubon's warbler
Alan Brelsford et al.
MOLECULAR ECOLOGY (2011)
Hybrid speciation in sparrows I: phenotypic intermediacy, genetic admixture and barriers to gene flow
Jo S. Hermansen et al.
MOLECULAR ECOLOGY (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Transcriptional activity of transposable elements in maize
Carlos M. Vicient
BMC GENOMICS (2010)
Different scales of Ty1/copia-like retrotransposon proliferation in the genomes of three diploid hybrid sunflower species
T. Kawakami et al.
HEREDITY (2010)
Enhanced drought-tolerance in the homoploid hybrid species Pinus densata: implication for its habitat divergence from two progenitors
Fei Ma et al.
NEW PHYTOLOGIST (2010)
Differential expression analysis for sequence count data
Simon Anders et al.
GENOME BIOLOGY (2010)
THE GENOMIC ORGANIZATION OF TY3/GYPSY-LIKE RETROTRANSPOSONS IN HELIANTHUS (ASTERACEAE) HOMOPLOID HYBRID SPECIES
S. Evan Staton et al.
AMERICAN JOURNAL OF BOTANY (2009)
The Role of Hybridization in Plant Speciation
Pamela S. Soltis et al.
ANNUAL REVIEW OF PLANT BIOLOGY (2009)
Epigenetic Regulation of Transposable Elements in Plants
Damon Lisch
ANNUAL REVIEW PLANT BIOLOGY (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data
Mark C. Ungerer et al.
BMC BIOLOGY (2009)
Epigenetic, transposon and small RNA determinants of hybrid dysfunctions
P. Michalak
HEREDITY (2009)
Population genetic analysis reveals a homoploid hybrid origin of Stephanomeria diegensis (Asteraceae)
Natasha A. Sherman et al.
MOLECULAR ECOLOGY (2009)
Extreme changes to gene expression associated with homoploid hybrid speciation
Matthew J. Hegarty et al.
MOLECULAR ECOLOGY (2009)
Bursts of retrotransposition reproduced in Arabidopsis
Sayuri Tsukahara et al.
NATURE (2009)
Selective epigenetic control of retrotransposition in Arabidopsis
Marie Mirouze et al.
NATURE (2009)
Evolutionary Genetics of Genome Merger and Doubling in Plants
Jeff J. Doyle et al.
ANNUAL REVIEW OF GENETICS (2008)
WGCNA: an R package for weighted correlation network analysis
Peter Langfelder et al.
BMC BIOINFORMATICS (2008)
The rate of genome stabilization in homoploid hybrid species
C. Alex Buerkle et al.
EVOLUTION (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
High-throughput functional annotation and data mining with the Blast2GO suite
Stefan Gotz et al.
NUCLEIC ACIDS RESEARCH (2008)
Heterosis: revisiting the magic
Zachary B. Lippman et al.
TRENDS IN GENETICS (2007)
Transposable elements and the epigenetic regulation of the genome
R. Keith Slotkin et al.
NATURE REVIEWS GENETICS (2007)
Parasitism and the retrotransposon life cycle in plants: a hitchhiker's guide to the genome
F. Sabot et al.
HEREDITY (2006)
Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferation
Mark C. Ungerer et al.
CURRENT BIOLOGY (2006)
Parent-dependent loss of gene silencing during interspecies hybridization
Caroline Josefsson et al.
CURRENT BIOLOGY (2006)
Speciation by hybridization in Heliconius butterflies
Jesus Mavarez et al.
NATURE (2006)
Microarray analysis reveals differential gene expression in hybrid sunflower species
Z Lai et al.
MOLECULAR ECOLOGY (2006)
Application of phylogenetic networks in evolutionary studies
DH Huson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Extensive chromosomal repatterning and the evolution of sterility barriers in hybrid sunflower species
Z Lai et al.
GENETICS (2005)
Hybridization and genome size evolution:: timing and magnitude of nuclear DNA content increases in Helianthus homoploid hybrid species
EJ Baack et al.
NEW PHYTOLOGIST (2005)
The ecological genetics of homoploid hybrid speciation
BL Gross et al.
JOURNAL OF HEREDITY (2005)
Hybrid speciation in plants: new insights from molecular studies
MJ Hegarty et al.
NEW PHYTOLOGIST (2005)
Polyploidy in arctic plants
C Brochmann et al.
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2004)
Reconstructing the origin of Helianthus deserticola:: Survival and selection on the desert floor
BL Gross et al.
AMERICAN NATURALIST (2004)
Genetic and functional diversification of small RNA pathways in plants
ZX Xie et al.
PLOS BIOLOGY (2004)
Origin(s) of the diploid hybrid species Helianthus deserticola (Asteraceae)
BL Gross et al.
AMERICAN JOURNAL OF BOTANY (2003)
Major ecological transitions in wild sunflowers facilitated by hybridization
LH Rieseberg et al.
SCIENCE (2003)
Likely multiple origins of a diploid hybrid sunflower species
AE Schwarzbach et al.
MOLECULAR ECOLOGY (2002)
Adaptive protein evolution in Drosophila
NGC Smith et al.
NATURE (2002)
Habitat divergence between a homoploid hybrid sunflower species, Helianthus paradoxus (Asteraceae), and its progenitors
ME Welch et al.
AMERICAN JOURNAL OF BOTANY (2002)
A direct approach to false discovery rates
JD Storey
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY (2002)