Related references
Note: Only part of the references are listed.Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
Stephen L. Cameron
ANNUAL REVIEW OF ENTOMOLOGY, VOL 59, 2014 (2014)
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
Yinlong Xie et al.
BIOINFORMATICS (2014)
Sequence analysis of mitochondrial ND1 gene can reveal the genetic structure and origin of Bactrocera dorsalis SS
Zhong-Zhen Wu et al.
BMC EVOLUTIONARY BIOLOGY (2014)
The complete mitochondrial genome of a turbinid vetigastropod from MiSeq Illumina sequencing of genomic DNA and steps towards a resolved gastropod phylogeny
S. T. Williams et al.
GENE (2014)
Evaluation of 11 single-locus and seven multilocus DNA barcodes in Lamium L. (Lamiaceae)
K. Krawczyk et al.
MOLECULAR ECOLOGY RESOURCES (2014)
Deep Sequencing of Mixed Total DNA without Barcodes Allows Efficient Assembly of Highly Plastic Ascidian Mitochondrial Genomes
Nimrod D. Rubinstein et al.
GENOME BIOLOGY AND EVOLUTION (2013)
Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae)
Fidel Botero-Castro et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2013)
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads-a baiting and iterative mapping approach
Christoph Hahn et al.
NUCLEIC ACIDS RESEARCH (2013)
A multi-locus approach to barcoding in the Anopheles strodei subgroup (Diptera: Culicidae)
Brian Patrick Bourke et al.
PARASITES & VECTORS (2013)
Improved Inference of Taxonomic Richness from Environmental DNA
Matthew J. Morgan et al.
PLOS ONE (2013)
SOAPBarcode: revealing arthropod biodiversity through assembly of Illumina shotgun sequences of PCR amplicons
Shanlin Liu et al.
METHODS IN ECOLOGY AND EVOLUTION (2013)
Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification
Xin Zhou et al.
GIGASCIENCE (2013)
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
Yu Peng et al.
BIOINFORMATICS (2012)
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Matthew Kearse et al.
BIOINFORMATICS (2012)
The complete mitogenome of Cylindrus obtusus (Helicidae, Ariantinae) using Illumina next generation sequencing
Dick S. J. Groenenberg et al.
BMC GENOMICS (2012)
A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
Michael A. Quail et al.
BMC GENOMICS (2012)
Coalescent-Based DNA Barcoding: Multilocus Analysis and Robustness
Olivier David et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Multi-locus species delimitation in closely related animals and fungi: one marker is not enough
Julian R. Dupuis et al.
MOLECULAR ECOLOGY (2012)
Towards next-generation biodiversity assessment using DNA metabarcoding
Pierre Taberlet et al.
MOLECULAR ECOLOGY (2012)
Rapid Sequencing of the Bamboo Mitochondrial Genome Using Illumina Technology and Parallel Episodic Evolution of Organelle Genomes in Grasses
Peng-Fei Ma et al.
PLOS ONE (2012)
Assessment of Three Mitochondrial Genes (16S, Cytb, CO1) for Identifying Species in the Praomyini Tribe (Rodentia: Muridae)
Violaine Nicolas et al.
PLOS ONE (2012)
Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes
Agnes Dettai et al.
PLOS ONE (2012)
Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
Douglas W. Yu et al.
METHODS IN ECOLOGY AND EVOLUTION (2012)
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
Ruibang Luo et al.
GIGASCIENCE (2012)
Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals
I. A. Arif et al.
GENETICS AND MOLECULAR RESEARCH (2011)
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas et al.
GENOME RESEARCH (2011)
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
Eva Bellemain et al.
BMC MICROBIOLOGY (2010)
De novo assembly of human genomes with massively parallel short read sequencing
Ruiqiang Li et al.
GENOME RESEARCH (2010)
Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle
Amanda D. Roe et al.
MOLECULAR ECOLOGY RESOURCES (2010)
Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics
M. J. T. N. Timmermans et al.
NUCLEIC ACIDS RESEARCH (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
A DNA barcode for land plants
Peter M. Hollingsworth et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
An inexpensive, automation-friendly protocol for recovering high-quality DNA
Natalia V. Ivanova et al.
MOLECULAR ECOLOGY NOTES (2006)
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
G Pertea et al.
BIOINFORMATICS (2003)
Biological identifications through DNA barcodes
PDN Hebert et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)