Related references
Note: Only part of the references are listed.Basal Splicing Factors Regulate the Stability of Mature mRNAs in Trypanosomes
Sachin Kumar Gupta et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Expression of the RNA recognition motif protein RBP10 promotes a bloodstream-form transcript pattern in Trypanosoma brucei
Martin Wurst et al.
MOLECULAR MICROBIOLOGY (2012)
The post-transcriptional trans-acting regulator, TbZFP3, co-ordinates transmission-stage enriched mRNAs in Trypanosoma brucei
Pegine B. Walrad et al.
NUCLEIC ACIDS RESEARCH (2012)
Dual targeting of isoleucyl-tRNA synthetase in Trypanosoma brucei is mediated through alternative trans-splicing
Jochen Rettig et al.
NUCLEIC ACIDS RESEARCH (2012)
Efficient motif search in ranked lists and applications to variable gap motifs
Limor Leibovich et al.
NUCLEIC ACIDS RESEARCH (2012)
Developmental Progression to Infectivity in Trypanosoma brucei Triggered by an RNA-Binding Protein
Nikolay G. Kolev et al.
SCIENCE (2012)
Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins
Stephanie C. Huelga et al.
CELL REPORTS (2012)
Trans-splicing in trypanosomes: machinery and its impact on the parasite transcriptome
Shulamit Michaeli
FUTURE MICROBIOLOGY (2011)
CDD: a Conserved Domain Database for the functional annotation of proteins
Aron Marchler-Bauer et al.
NUCLEIC ACIDS RESEARCH (2011)
Alba-Domain Proteins of Trypanosoma brucei Are Cytoplasmic RNA-Binding Proteins That Interact with the Translation Machinery
Jan Mani et al.
PLOS ONE (2011)
Trans-acting proteins regulating mRNA maturation, stability and translation in trypanosomatids
Susanne Kramer et al.
TRENDS IN PARASITOLOGY (2011)
Functional diversity of the hnRNPs: past, present and perspectives
Siew Ping Han et al.
BIOCHEMICAL JOURNAL (2010)
Analysis of Spliceosomal Proteins in Trypanosomatids Reveals Novel Functions in mRNA Processing
Itai Dov Tkacz et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
'RNA walk' a novel approach to study RNA-RNA interactions between a small RNA and its target
Yaniv Lustig et al.
NUCLEIC ACIDS RESEARCH (2010)
Establishment of an in vitro trans-splicing system in Trypanosoma brucei that requires endogenous spliced leader RNA
Hadassa Shaked et al.
NUCLEIC ACIDS RESEARCH (2010)
SFmap: a web server for motif analysis and prediction of splicing factor binding sites
Inbal Paz et al.
NUCLEIC ACIDS RESEARCH (2010)
Genome-wide analysis of mRNA abundance in two life-cycle stages of Trypanosoma brucei and identification of splicing and polyadenylation sites
Tim Nicolai Siegel et al.
NUCLEIC ACIDS RESEARCH (2010)
Regulation of Alternative Splicing by Histone Modifications
Reini F. Luco et al.
SCIENCE (2010)
The Transcriptome of the Human Pathogen Trypanosoma brucei at Single-Nucleotide Resolution
Nikolay G. Kolev et al.
PLOS PATHOGENS (2010)
Spliced Leader Trapping Reveals Widespread Alternative Splicing Patterns in the Highly Dynamic Transcriptome of Trypanosoma brucei
Daniel Nilsson et al.
PLOS PATHOGENS (2010)
Persistent ER Stress Induces the Spliced Leader RNA Silencing Pathway (SLS), Leading to Programmed Cell Death in Trypanosoma brucei
Hanoch Goldshmidt et al.
PLOS PATHOGENS (2010)
Transcriptome analysis of differentiating trypanosomes reveals the existence of multiple post-transcriptional regulons
Rafael Queiroz et al.
BMC GENOMICS (2009)
Trypanosome Spliced-Leader-Associated RNA (SLA1) Localization and Implications for Spliced-Leader RNA Biogenesis
Avraham Hury et al.
EUKARYOTIC CELL (2009)
Spliceosomal Proteomics in Trypanosoma brucei Reveal New RNA Splicing Factors
Daniela Luz Ambrosio et al.
EUKARYOTIC CELL (2009)
Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei
T. Nicolai Siegel et al.
GENES & DEVELOPMENT (2009)
Functional characterization and protein-protein interactions of trypanosome splicing factors U2AF35, U2AF65 and SF1
Martin P. Vazquez et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2009)
Genome-wide Analysis of PTB-RNA Interactions Reveals a Strategy Used by the General Splicing Repressor to Modulate Exon Inclusion or Skipping
Yuanchao Xue et al.
MOLECULAR CELL (2009)
Multiple roles for polypyrimidine tract binding (PTB) proteins in trypanosome RNA metabolism
Michael Zeev Stern et al.
RNA (2009)
Differential Trypanosome Surface Coat Regulation by a CCCH Protein That Co-Associates with procyclin mRNA cis-Elements
Pegine Walrad et al.
PLOS PATHOGENS (2009)
A computational approach for genome-wide mapping of splicing factor binding sites
Martin Akerman et al.
GENOME BIOLOGY (2009)
Regulation of an amino acid transporter mRNA in Trypanosoma brucei
Ana Robles et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2008)
Identification of the heptameric Lsm complex that binds U6 snRNA in Trypanosoma brucei
Itai Dov Tkacz et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2008)
The RNA-binding protein TbDRBD3 regulates the stability of a specific subset of mRNAs in trypanosomes
Antonio M. Estevez
NUCLEIC ACIDS RESEARCH (2008)
Post-transcriptional regulation of gene expression in trypanosomes and leishmanias
Christine Clayton et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2007)
A comparison of background correction methods for two-colour microarrays
Matthew E. Ritchie et al.
BIOINFORMATICS (2007)
ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins
Markus Wiederstein et al.
NUCLEIC ACIDS RESEARCH (2007)
Spliced-leader RNA silencing:: a novel stress-induced mechanism in Trypanosoma brucei
Yaniv Lustig et al.
EMBO REPORTS (2007)
Discovering motifs in ranked lists of DNA sequences
Eran Eden et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Regulated expression of glycosomal phosphoglycerate kinase in Trypanosoma brucei
Claudia Colasante et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2007)
Analysis of spliceosomal complexes in Trypanosoma brucei and silencing of two splicing factors Prp31 and Prp43
XH Liang et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2006)
Systematic study of sequence motifs for RNA trans splicing in Trypanosoma brucei
TN Siegel et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
The HHpred interactive server for protein homology detection and structure prediction
J Söding et al.
NUCLEIC ACIDS RESEARCH (2005)
Heterogeneous nuclear ribonucleoprotein F/H proteins modulate the alternative splicing of the apoptotic mediator Bcl-x
D Garneau et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Heterogeneous nuclear ribonucleoproteins F and H/H′ show differential expression in normal and selected cancer tissues
B Honoré et al.
EXPERIMENTAL CELL RESEARCH (2004)
limmaGUI: A graphical user interface for linear modeling of microarray data
JM Wettenhall et al.
BIOINFORMATICS (2004)
Validation of Trypanosoma brucei trypanothione synthetase as drug target
MA Comini et al.
FREE RADICAL BIOLOGY AND MEDICINE (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Silencing of Sm proteins in Trypanosoma brucei by RNA interference captured a novel cytoplasmic intermediate in spliced leader RNA biogenesis
M Mandelboim et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
A role for the exosome in the in vivo degradation of unstable mRNAs
S Haile et al.
RNA (2003)
trans and cis splicing in trypanosomatids:: Mechanism, factors, and regulation
XH Liang et al.
EUKARYOTIC CELL (2003)
Normalization of cDNA microarray data
GK Smyth et al.
METHODS (2003)
SR proteins and hnRNP H regulate the splicing of the HIV-1 tev-specific exon 6D
M Caputi et al.
EMBO JOURNAL (2002)
Identification of a multifunctional domain in autonomously replicating sequence-binding factor 1 required for transcriptional activation, DNA replication, and gene silencing
T Miyake et al.
MOLECULAR AND CELLULAR BIOLOGY (2002)
Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H′/F/2H9 family
M Caputi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Identification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA
XH Liang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Expression studies on clustered trypanosomatid box C/D small nucleolar RNAs
YX Xu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
hnRNP F influences binding of a 64-kilodalton subunit of cleavage stimulation factor to mRNA precursors in mouse B cells
KL Veraldi et al.
MOLECULAR AND CELLULAR BIOLOGY (2001)
Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promoters
ZF Wang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Characterization of a Trypanosoma brucei SR domain-containing protein bearing homology to cis-spliceosomal U1 70 kDa proteins
N Ismaïli et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2000)