Related references
Note: Only part of the references are listed.MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements
Guojun Yang
BMC BIOINFORMATICS (2013)
Comparison of class 2 transposable elements at superfamily resolution reveals conserved and distinct features in cereal grass genomes
Yujun Han et al.
BMC GENOMICS (2013)
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions
Shaogui Guo et al.
NATURE GENETICS (2013)
The draft genome of sweet orange (Citrus sinensis)
Qiang Xu et al.
NATURE GENETICS (2013)
Miniature Inverted-Repeat Transposable Elements (MITEs) Have Been Accumulated through Amplification Bursts and Play Important Roles in Gene Expression and Species Diversity in Oryza sativa
Chen Lu et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
Angelique D'Hont et al.
NATURE (2012)
The tomato genome sequence provides insights into fleshy fruit evolution
Shusei Sato et al.
NATURE (2012)
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
Rajeev K. Varshney et al.
NATURE BIOTECHNOLOGY (2012)
Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential
Gengyun Zhang et al.
NATURE BIOTECHNOLOGY (2012)
The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads
Zhiwen Wang et al.
PLANT JOURNAL (2012)
Insights into salt tolerance from the genome of Thellungiella salsuginea
Hua-Jun Wu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
The genome of melon (Cucumis melo L.)
Jordi Garcia-Mas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Characterization of active miniature inverted-repeat transposable elements in the peanut genome
Kenta Shirasawa et al.
THEORETICAL AND APPLIED GENETICS (2012)
Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution
Beery Yaakov et al.
THEORETICAL AND APPLIED GENETICS (2012)
The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
Guillaume Blanc et al.
GENOME BIOLOGY (2012)
The Cassava Genome: Current Progress, Future Directions
Simon Prochnik et al.
TROPICAL PLANT BIOLOGY (2012)
Sequence Analysis of the Genome of an Oil-Bearing Tree, Jatropha curcas L.
Shusei Sato et al.
DNA RESEARCH (2011)
Genome sequence and analysis of the tuber crop potato
Xun Xu et al.
NATURE (2011)
De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)
Eman K. Al-Dous et al.
NATURE BIOTECHNOLOGY (2011)
The genome of Theobroma cacao
Xavier Argout et al.
NATURE GENETICS (2011)
The genome of woodland strawberry (Fragaria vesca)
Vladimir Shulaev et al.
NATURE GENETICS (2011)
The genome of the mesopolyploid crop species Brassica rapa
Xiaowu Wang et al.
NATURE GENETICS (2011)
The genome of the extremophile crucifer Thellungiella parvula
Maheshi Dassanayake et al.
NATURE GENETICS (2011)
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
Tina T. Hu et al.
NATURE GENETICS (2011)
The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Jo Ann Banks et al.
SCIENCE (2011)
The draft genome and transcriptome of Cannabis sativa
Harm van Bakel et al.
GENOME BIOLOGY (2011)
Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel et al.
NATURE (2010)
Genome sequence of the palaeopolyploid soybean
Jeremy Schmutz et al.
NATURE (2010)
Draft genome sequence of the oilseed species Ricinus communis
Agnes P. Chan et al.
NATURE BIOTECHNOLOGY (2010)
The genome of the domesticated apple (Malus x domestica Borkh.)
Riccardo Velasco et al.
NATURE GENETICS (2010)
MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences
Yujun Han et al.
NUCLEIC ACIDS RESEARCH (2010)
The Chlorella variabilis NC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex
Guillaume Blanc et al.
PLANT CELL (2010)
Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
Simon E. Prochnik et al.
SCIENCE (2010)
MUST: A system for identification of miniature inverted-repeat transposable elements and applications to Anabaena variabilis and Haloquadratum walsbyi
Yong Chen et al.
GENE (2009)
Epigenetic silencing of transposable elements: A trade-off between reduced transposition and deleterious effects on neighboring gene expression
Jesse D. Hollister et al.
GENOME RESEARCH (2009)
The Sorghum bicolor genome and the diversification of grasses
Andrew H. Paterson et al.
NATURE (2009)
The genome of the cucumber, Cucumis sativus L.
Sanwen Huang et al.
NATURE GENETICS (2009)
The B73 Maize Genome: Complexity, Diversity, and Dynamics
Patrick S. Schnable et al.
SCIENCE (2009)
Genome Structure of the Legume, Lotus japonicus
Shusei Sato et al.
DNA RESEARCH (2008)
Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional implications for MITEs
H. Kuang et al.
GENOME RESEARCH (2008)
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
Ray Ming et al.
NATURE (2008)
A universal classification of eukaryotic transposable elements implemented in Repbase
Vladimir V. Kapitonov et al.
NATURE REVIEWS GENETICS (2008)
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
Stefan A. Rensing et al.
SCIENCE (2008)
A unified classification system for eukaryotic transposable elements
Thomas Wicker et al.
NATURE REVIEWS GENETICS (2007)
The Chlamydomonas genome reveals the evolution of key animal and plant functions
Sabeeha S. Merchant et al.
SCIENCE (2007)
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
Olivier Jaillon et al.
NATURE (2007)
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
G. A. Tuskan et al.
SCIENCE (2006)
The map-based sequence of the rice genome
T Matsumoto et al.
NATURE (2005)
A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter
GJ Yang et al.
PLANT CELL (2005)
Repbase update, a database of eukaryotic repetitive elements
J Jurka et al.
CYTOGENETIC AND GENOME RESEARCH (2005)
Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D
M Matsuzaki et al.
NATURE (2004)
The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants
S Ouyang et al.
NUCLEIC ACIDS RESEARCH (2004)
Genome-wide analysis of the emigrant family of MITEs of Arabidopsis thaliana
N Santiago et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
Micron, a microsatellite-targeting transposable element in the rice genome
H Akagi et al.
MOLECULAR GENETICS AND GENOMICS (2001)
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
S Kaul et al.
NATURE (2000)
The MITE family Heartbreaker (Hbr):: Molecular markers in maize
AM Casa et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon
C Feschotte et al.
MOLECULAR BIOLOGY AND EVOLUTION (2000)