4.8 Article

ClusterMine360: a database of microbial PKS/NRPS biosynthesis

Journal

NUCLEIC ACIDS RESEARCH
Volume 41, Issue D1, Pages D402-D407

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gks993

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Funding

  1. National Science and Engineering Research Council of Canada (NSERC)
  2. Ontario Ministry of Research and Innovation
  3. University of Ottawa
  4. NSERC

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ClusterMine360 (http://www.clustermine360.ca/) is a database of microbial polyketide and non-ribosomal peptide gene clusters. It takes advantage of crowd-sourcing by allowing members of the community to make contributions while automation is used to help achieve high data consistency and quality. The database currently has > 200 gene clusters from > 185 compound families. It also features a unique sequence repository containing > 10 000 polyketide synthase/non-ribosomal peptide synthetase domains. The sequences are filterable and downloadable as individual or multiple sequence FASTA files. We are confident that this database will be a useful resource for members of the polyketide synthases/non-ribosomal peptide synthetases research community, enabling them to keep up with the growing number of sequenced gene clusters and rapidly mine these clusters for functional information.

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