4.8 Article

Dfam: a database of repetitive DNA based on profile hidden Markov models

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

PSI-Search: iterative HOE-reduced profile SSEARCH searching

Weizhong Li et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

The Pfam protein families database

Marco Punta et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Rfam: Wikipedia, clans and the decimal release

Paul P. Gardner et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

Accelerated Profile HMM Searches

Sean R. Eddy

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Genetics & Heredity

Repetitive Elements May Comprise Over Two-Thirds of the Human Genome

A. P. Jason de Koning et al.

PLOS GENETICS (2011)

Article Cell Biology

Repbase update, a database of eukaryotic repetitive elements

J Jurka et al.

CYTOGENETIC AND GENOME RESEARCH (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)