4.8 Article

iELM-a web server to explore short linear motif-mediated interactions

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

The identification of short linear motif-mediated interfaces within the human interactome

R. J. Weatheritt et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

Attributes of short linear motifs

Norman E. Davey et al.

MOLECULAR BIOSYSTEMS (2012)

Article Biochemistry & Molecular Biology

ELM-the database of eukaryotic linear motifs

Holger Dinkel et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Phospho.ELM: a database of phosphorylation sites-update 2011

Holger Dinkel et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

3did: identification and classification of domain-based interactions of known three-dimensional structure

Amelie Stein et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

Ensembl 2011

Paul Flicek et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

Damian Szklarczyk et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

SLiMSearch 2.0: biological context for short linear motifs in proteins

Norman E. Davey et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

Retro-MoRFs: Identifying Protein Binding Sites by Normal and Reverse Alignment and Intrinsic Disorder Prediction

Bin Xue et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2010)

Article Biochemistry & Molecular Biology

The Pfam protein families database

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

The Universal Protein Resource (UniProt) in 2010

Rolf Apweiler et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Large-Scale Discovery and Characterization of Protein Regulatory Motifs in Eukaryotes

Daniel S. Lieber et al.

PLOS ONE (2010)

Article Biochemical Research Methods

A structure filter for the Eukaryotic Linear Motif Resource

Allegra Via et al.

BMC BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Minimotif miner 2nd release: a database and web system for motif search

Sanguthevar Rajasekaran et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Biochemistry & Molecular Biology

Cell regulation: determined to signal discrete cooperation

Toby J. Gibson

TRENDS IN BIOCHEMICAL SCIENCES (2009)

Article Biochemical Research Methods

Accurate Prediction of Peptide Binding Sites on Protein Surfaces

Evangelia Petsalaki et al.

PLOS COMPUTATIONAL BIOLOGY (2009)

Article Biochemical Research Methods

Prediction of Protein Binding Regions in Disordered Proteins

Balint Meszaros et al.

PLOS COMPUTATIONAL BIOLOGY (2009)

Article Biochemical Research Methods

A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences

Claudia Chica et al.

BMC BIOINFORMATICS (2008)

Review Biochemistry & Molecular Biology

Understanding eukaryotic linear motifs and their role in cell signaling and regulation

Francesca Diella et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2008)

Review Biochemistry & Molecular Biology

Viral infection and human disease - insights from minimotifs

Krishna Kadaveru et al.

FRONTIERS IN BIOSCIENCE (2008)

Article Biochemistry & Molecular Biology

NetworKIN: a resource for exploring cellular phosphorylation networks

Rune Linding et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemical Research Methods

A computational strategy for the prediction of functional linear peptide motifs in proteins

Holger Dinkel et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

The SLiMDisc server: short, linear motif discovery in proteins

Norman E. Davey et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemical Research Methods

Local structural disorder imparts plasticity on linear motifs

Monika Fuxreiter et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

Systematic discovery of new recognition peptides mediating protein interaction networks

V Neduva et al.

PLOS BIOLOGY (2005)

Article Biochemistry & Molecular Biology

Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs

JC Obenauer et al.

NUCLEIC ACIDS RESEARCH (2003)