Related references
Note: Only part of the references are listed.MiRonTop: mining microRNAs targets across large scale gene expression studies
Kevin Le Brigand et al.
BIOINFORMATICS (2010)
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
Markus Hafner et al.
CELL (2010)
Identifying targets of miR-143 using a SILAC-based proteomic approach
Yi Yang et al.
MOLECULAR BIOSYSTEMS (2010)
Diverse Endonucleolytic Cleavage Sites in the Mammalian Transcriptome Depend upon MicroRNAs, Drosha, and Additional Nucleases
Fedor V. Karginov et al.
MOLECULAR CELL (2010)
Expanding the MicroRNA Targeting Code: Functional Sites with Centered Pairing
Chanseok Shin et al.
MOLECULAR CELL (2010)
Mammalian microRNAs predominantly act to decrease target mRNA levels
Huili Guo et al.
NATURE (2010)
Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans
Dimitrios G. Zisoulis et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)
Targeting of mRNAs by multiple miRNAs: the next step
M. E. Peter
ONCOGENE (2010)
Multiple microRNAs modulate p21Cip1/Waf1 expression by directly targeting its 3 ' untranslated region
S. Wu et al.
ONCOGENE (2010)
Transcriptome-wide identification of microRNA targets in rice
Yong-Fang Li et al.
PLANT JOURNAL (2010)
Affinity purification of microRNA-133a with the cardiac transcription factor, Hand2
Ngan K. Vo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Transcriptome and targetome analysis in MIR155 expressing cells using RNA-seq
Guorong Xu et al.
RNA (2010)
CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets
Charles Addo-Quaye et al.
BIOINFORMATICS (2009)
Lost in translation: an assessment and perspective for computational microRNA target identification
Panagiotis Alexiou et al.
BIOINFORMATICS (2009)
Systematic validation of predicted microRNAs for cyclin D1
Qiong Jiang et al.
BMC CANCER (2009)
MiRNA-29a regulates the expression of numerous proteins and reduces the invasiveness and proliferation of human carcinoma cell lines
M. K. Muniyappa et al.
EUROPEAN JOURNAL OF CANCER (2009)
Coherent but overlapping expression of microRNAs and their targets during vertebrate development
Alena Shkumatava et al.
GENES & DEVELOPMENT (2009)
miR-24 Inhibits Cell Proliferation by Targeting E2F2, MYC, and Other Cell-Cycle Genes via Binding to Seedless 3′UTR MicroRNA Recognition Elements
Ashish Lal et al.
MOLECULAR CELL (2009)
A three-dimensional view of the molecular machinery of RNA interference
Martin Jinek et al.
NATURE (2009)
Predicting microRNA targets and functions: traps for the unwary
William Ritchie et al.
NATURE METHODS (2009)
Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome
Marcelo A. German et al.
NATURE PROTOCOLS (2009)
Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells
Takeshi Haraguchi et al.
NUCLEIC ACIDS RESEARCH (2009)
Investigating Translational Repression by MicroRNAs in Arabidopsis
Nancy A. Eckardt
PLANT CELL (2009)
Concordant Regulation of Translation and mRNA Abundance for Hundreds of Targets of a Human microRNA
David G. Hendrickson et al.
PLOS BIOLOGY (2009)
A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition
Cameron P. Bracken et al.
CANCER RESEARCH (2008)
Interplay between microRNAs and RNA-binding proteins determines developmental processes
Martijn Kedde et al.
CELL CYCLE (2008)
A link between RNA metabolism and silencing affecting Arabidopsis development
Brian D. Gregory et al.
DEVELOPMENTAL CELL (2008)
The miR-200 family determines the epithelial phenotype of cancer cells by targeting the E-cadherin repressors ZEB1 and ZEB2
Sun-Mi Park et al.
GENES & DEVELOPMENT (2008)
MicroRNA-10a binds the 5′UTR of ribosomal protein mRNAs and enhances their translation
Ulf Andersson Orom et al.
MOLECULAR CELL (2008)
The impact of microRNAs on protein output
Daehyun Baek et al.
NATURE (2008)
Widespread changes in protein synthesis induced by microRNAs
Matthias Selbach et al.
NATURE (2008)
LNA-mediated microRNA silencing in non-human primates
Joacim Elmen et al.
NATURE (2008)
Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends
Marcelo A. German et al.
NATURE BIOTECHNOLOGY (2008)
Experimental validation of miRNA targets
Donald E. Kuhn et al.
METHODS (2008)
Systematic Identification of mRNAs Recruited to Argonaute 2 by Specific microRNAs and Corresponding Changes in Transcript Abundance
David G. Hendrickson et al.
PLOS ONE (2008)
The mechanism of micro-RNA-mediated translation repression is determined by the promoter of the target gene
Yi Wen Kong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
MicroRNA-373 induces expression of genes with complementary promoter sequences
Robert F. Place et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
A novel biochemical method to identify target genes of individual microRNAs: Identification of a new Caenorhabditis elegans let-7 target
Yoshiki Andachi
RNA (2008)
Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver
Joacim Elmen et al.
NUCLEIC ACIDS RESEARCH (2008)
Ensembl 2008
P. Flicek et al.
NUCLEIC ACIDS RESEARCH (2008)
Switching from repression to activation: MicroRNAs can up-regulate translation
Shobha Vasudevan et al.
SCIENCE (2007)
A biochemical approach to identifying microRNA targets
Fedor V. Karginov et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Isolation of microRNA targets using biotinylated synthetic microRNAs
Ulf Andersson Orom et al.
METHODS (2007)
MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells
Margaret S. Ebert et al.
NATURE METHODS (2007)
Isolation of microRNA targets by miRNP immunopurification
George Easow et al.
RNA (2007)
Molecular basis for target RNA recognition and cleavage by human RISC
Stefan Ludwig Ameres et al.
CELL (2007)
MicroRNA targeting specificity in mammals: Determinants beyond seed pairing
Andrew Grimson et al.
MOLECULAR CELL (2007)
Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5′ UTR as in the 3′ UTR
J. Robin Lytle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
MicroRNA-21 targets the tumor suppressor gene tropomyosin 1 (TPM1)
Shuomin Zhu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Identification of human microRNA targets from isolated argonaute protein complexes
Michaela Beitzinger et al.
RNA BIOLOGY (2007)
A guide through present computational approaches for the identification of mammalian microRNA targets
Praveen Sethupathy et al.
NATURE METHODS (2006)
Perfect seed pairing is not a generally reliable predictor for miRNA-target interactions
Dominic Didiano et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)
Identification of miRNA targets with stable isotope labeling by amino acids in cell culture
Jeppe Vinther et al.
NUCLEIC ACIDS RESEARCH (2006)
The cartilage specific microRNA-140 targets histone deacetylase 4 in mouse cells
Lee Tuddenham et al.
FEBS LETTERS (2006)
MRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes
Isabelle Behm-Ansmant et al.
GENES & DEVELOPMENT (2006)
A novel method to detect functional microRNA targets
Sergei Vatolin et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Silencing of microRNAs in vivo with 'antagomirs'
J Krützfeldt et al.
NATURE (2005)
Prediction and validation of microRNAs and their targets
I Bentwich
FEBS LETTERS (2005)
Pervasive regulation of Drosophila Notch target genes by GY-box-, Brd-box-, and K-box-class microRNAs
EC Lai et al.
GENES & DEVELOPMENT (2005)
Combinatorial microRNA target predictions
A Krek et al.
NATURE GENETICS (2005)
Principles of MicroRNA-target recognition
J Brennecke et al.
PLOS BIOLOGY (2005)
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
LP Lim et al.
NATURE (2005)
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
BP Lewis et al.
CELL (2005)
MicroRNA-directed cleavage of HOXB8 mRNA
S Yekta et al.
SCIENCE (2004)
Specificity of microRNA target selection in translational repression
JG Doench et al.
GENES & DEVELOPMENT (2004)
MicroRNAs: Genomics, biogenesis, mechanism, and function
DP Bartel
CELL (2004)
The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3′UTR
MC Vella et al.
GENES & DEVELOPMENT (2004)
Argonaute2 is the catalytic engine of mammalian RNAi
JD Liu et al.
SCIENCE (2004)
Human Argonaute2 mediates RNA cleavage targeted by miRNAs and siRNAs
G Meister et al.
MOLECULAR CELL (2004)
Distinct roles for argonaute proteins in small RNA-directed RNA cleavage pathways
K Okamura et al.
GENES & DEVELOPMENT (2004)
Evidence for reassociation of RNA-binding proteins after cell lysis: Implications for the interpretation of immunoprecipitation analyses
S Mili et al.
RNA (2004)
Prediction of mammalian microRNA targets
BP Lewis et al.
CELL (2003)
The microRNAs of Caenorhabditis elegans
LP Lim et al.
GENES & DEVELOPMENT (2003)
Identification of Drosophila MicroRNA targets
A Stark et al.
PLOS BIOLOGY (2003)
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
C Llave et al.
SCIENCE (2002)
Share Paper
