Related references
Note: Only part of the references are listed.An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation
Tamir Tuller et al.
CELL (2010)
Reconstructing ancestral gene content by coevolution
Tamir Tuller et al.
GENOME RESEARCH (2010)
Translation efficiency in humans: tissue specificity, global optimization and differences between developmental stages
Yedael Y. Waldman et al.
NUCLEIC ACIDS RESEARCH (2010)
The large-scale organization of the bacterial network of ecological co-occurrence interactions
Shiri Freilich et al.
NUCLEIC ACIDS RESEARCH (2010)
Translation efficiency is determined by both codon bias and folding energy
Tamir Tuller et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
An Evolutionary Analysis of Lateral Gene Transfer in Thymidylate Synthase Enzymes
Adi Stern et al.
SYSTEMATIC BIOLOGY (2010)
The Systemic Imprint of Growth and Its Uses in Ecological (Meta) Genomics
Sara Vieira-Silva et al.
PLOS GENETICS (2010)
Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences
Iris Bahir et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
Coding-Sequence Determinants of Gene Expression in Escherichia coli
Grzegorz Kudla et al.
SCIENCE (2009)
Co-evolutionary networks of genes and cellular processes across fungal species
Tamir Tuller et al.
GENOME BIOLOGY (2009)
Inferring horizontal transfers in the presence of rearrangements by the minimum evolution criterion
Hadas Birin et al.
BIOINFORMATICS (2008)
Transcription of foreign DNA in Escherichia coli
Rene L. Warren et al.
GENOME RESEARCH (2008)
Neutrality of foreign complex subunits in an experimental model of lateral gene transfer
Alon Wellner et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
Tal Dagan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Determinants of protein abundance and translation efficiency in S-cerevisiae
Tamir Tuller et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Genome-wide experimental determination of barriers to horizontal gene transfer
Rotem Sorek et al.
SCIENCE (2007)
Differential translation efficiency of orthologous genes is involved in phenotypic divergence of yeast species
Orna Man et al.
NATURE GENETICS (2007)
Pattern pluralism and the Tree of Life hypothesis
W. Ford Doolittle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Ancestral genome sizes specify the minimum rate of lateral gene transfer during prokaryote evolution
Tal Dagan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Complexity, connectivity, and duplicability as barriers to lateral gene transfer
Alon Wellner et al.
GENOME BIOLOGY (2007)
Modularity and community structure in networks
M. E. J. Newman
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Do different surrogate methods detect lateral genetic transfer events of different relative ages?
MA Ragan et al.
TRENDS IN MICROBIOLOGY (2006)
Environments shape the nucleotide composition of genomes
KU Foerstner et al.
EMBO REPORTS (2005)
Highways of gene sharing in prokaryotes
RG Beiko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Why highly expressed proteins evolve slowly
DA Drummond et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Mathematical modeling of evolution of horizontally transferred genes
AS Novozhilov et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
Predicting functional gene links from phylogenetic-statistical analyses of whole genomes
D Barker et al.
PLOS COMPUTATIONAL BIOLOGY (2005)
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
CM Thomas et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Only a small subset of the horizontally transferred chromosomal genes in Escherichia coli are translated into proteins
M Taoka et al.
MOLECULAR & CELLULAR PROTEOMICS (2004)
Biased biological functions of horizontally transferred genes in prokaryotic genomes
Y Nakamura et al.
NATURE GENETICS (2004)
Solving the riddle of codon usage preferences: a test for translational selection
M dos Reis et al.
NUCLEIC ACIDS RESEARCH (2004)
Successful lateral transfer requires codon usage compatibility between foreign genes and recipient genomes
A Medrano-Soto et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
The COG database: an updated version includes eukaryotes
RL Tatusov et al.
BMC BIOINFORMATICS (2003)
Toward a protein profile of Escherichia coli:: Comparison to its transcription profile
RW Corbin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Prokaryotic evolution in light of gene transfer
JP Gogarten et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution
I Kobayashi
NUCLEIC ACIDS RESEARCH (2001)
Horizontal gene transfer in bacterial and archaeal complete genomes
S Garcia-Vallvé et al.
GENOME RESEARCH (2000)