4.8 Article

OriDB, the DNA replication origin database updated and extended

Journal

NUCLEIC ACIDS RESEARCH
Volume 40, Issue D1, Pages D682-D686

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkr1091

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Funding

  1. The Royal Society
  2. The University of Nottingham
  3. Biotechnology and Biological Sciences Research Council [BB/E023754/1, BB/G001596/1]
  4. David Phillips Fellowship
  5. Biotechnology and Biological Sciences Research Council
  6. BBSRC [BB/E023754/1, BB/G001596/1] Funding Source: UKRI

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OriDB (http://www.oridb.org/) is a database containing collated genome-wide mapping studies of confirmed and predicted replication origin sites. The original database collated and curated Saccharomyces cerevisiae origin mapping studies. Here, we report that the OriDB database and web site have been revamped to improve user accessibility to curated data sets, to greatly increase the number of curated origin mapping studies, and to include the collation of replication origin sites in the fission yeast Schizosaccharomyces pombe. The revised database structure underlies these improvements and will facilitate further expansion in the future. The updated OriDB for S. cerevisiae is available at http://cerevisiae.oridb.org/ and for S. pombe at http://pombe.oridb.org/.

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