4.5 Article

Phylogenetic classification of yeasts and related taxa within Pucciniomycotina

Journal

STUDIES IN MYCOLOGY
Volume -, Issue 81, Pages 149-189

Publisher

CENTRAALBUREAU SCHIMMELCULTURE
DOI: 10.1016/j.simyco.2015.12.002

Keywords

Fungi; GMYC approach; Molecular phylogeny; Phylogenetic rank boundary optimisation; Pucciniomycotina; Taxonomy; Yeasts

Categories

Funding

  1. National Natural Science Foundation of China (NSFC) [30970013, 31010103902]
  2. Youth Innovation Promotion Association of the Chinese Academy of Sciences [2012078]
  3. Royal Netherlands Academy of Arts and Sciences (KNAW) [10CDP019]
  4. Fundacao para a Ciencia e a Tecnologia, Portugal [PTDC/BIA-BIC/4585/2012]
  5. Qatar Foundation [NPRP 5-298-3-086]
  6. Fundação para a Ciência e a Tecnologia [PTDC/BIA-BIC/4585/2012] Funding Source: FCT

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Most small genera containing yeast species in the Pucciniomycotina (Basidiomycota, Fungi) are monophyletic, whereas larger genera including Bensingtonia, Rhodosporidium, Rhodotorula, Sporidiobolus and Sporobolomyces are polyphyletic. With the implementation of the One Fungus = One Name nomenclatural principle these polyphyletic genera were revised. Nine genera, namely Bannoa, Cystobasidiopsis, Colacogloea, Kondoa, Erythrobasidium, Rhodotorula, Sporobolomyces, Sakaguchia and Sterigmatomyces, were emended to include anamorphic and teleomorphic species based on the results obtained by a multi-gene phylogenetic analysis, phylogenetic network analyses, branch length-based methods, as well as morphological, physiological and biochemical comparisons. A new class Spiculogloeomycetes is proposed to accommodate the order Spiculogloeales. The new families Buckleyzymaceae with Buckleyzyma gen. nov., Chrysozymaceae with Chrysozyma gen. nov., Microsporomycetaceae with Microsporomyces gen. nov., Ruineniaceae with Ruinenia gen. nov., Symmetrosporaceae with Symmetrospora gen. nov., Colacogloeaceae and Sakaguchiaceae are proposed. The new genera Bannozyma, Buckleyzyma, Fellozyma, Hamamotoa, Hasegawazyma, Jianyunia, Rhodosporidiobolus, Oberwinklerozyma, Phenoliferia, Pseudobensingtonia, Pseudohyphozyma, Sampaiozyma, Slooffia, Spencerozyma, Trigonosporomyces, Udeniozyma, Vonarxula, Yamadamyces and Yunzhangia are proposed to accommodate species segregated from the genera Bensingtonia, Rhodosporidium, Rhodotorula, Sporidiobolus and Sporobolomyces. Ballistosporomyces is emended and reintroduced to include three Sporobolomyces species of the sasicola clade. A total of 111 new combinations are proposed in this study.

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