4.3 Article

Eyes-Open/Eyes-Closed Dataset Sharing for Reproducibility Evaluation of Resting State fMRI Data Analysis Methods

Journal

NEUROINFORMATICS
Volume 11, Issue 4, Pages 469-476

Publisher

HUMANA PRESS INC
DOI: 10.1007/s12021-013-9187-0

Keywords

Resting state fMRI measures; Reproducibility; Data sharing; Eyes open; Eyes closed

Funding

  1. National Natural Science Foundation of China [30770594]
  2. National High Technology Program of China (863) [2008AA02Z405]

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The multi-scan resting state fMRI (rs-fMRI) dataset was recently released; thus the test-retest (TRT) reliability of rs-fMRI measures can be assessed. However, because this dataset was acquired only from a single group under a single condition, we cannot directly evaluate whether the rs-fMRI measures can generate reproducible between-condition or between-group results. Because the modulation of resting state activity has gained increasing attention, it is important to know whether one rs-fMRI metric can reliably detect the alteration of the resting activity. Here, we shared a public Eyes-Open (EO)/Eyes-Closed (EC) dataset for evaluating the split-half reproducibility of the rs-fMRI measures in detecting changes of the resting state activity between EO and EC. As examples, we assessed the split-half reproducibility of three widely applied rs-fMRI metrics: amplitude of low frequency fluctuation, regional homogeneity, and seed-based correlation analysis. Our results demonstrated that reproducible patterns of EO-EC differences can be detected by all three measures, suggesting the feasibility of the EO/EC dataset for performing reproducibility assessment for other rs-fMRI measures.

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