Related references
Note: Only part of the references are listed.Genome Architecture: Domain Organization of Interphase Chromosomes
Wendy A. Bickmore et al.
CELL (2013)
The circadian epigenome: how metabolism talks to chromatin remodeling
Lorena Aguilar-Arnal et al.
CURRENT OPINION IN CELL BIOLOGY (2013)
Spatial congregation of STAT binding directs selective nuclear architecture during T-cell functional differentiation
Ofir Hakim et al.
GENOME RESEARCH (2013)
Functional implications of genome topology
Giacomo Cavalli et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Central and Peripheral Circadian Clocks in Mammals
Jennifer A. Mohawk et al.
ANNUAL REVIEW OF NEUROSCIENCE, VOL 35 (2012)
Spatial Organization of the Mouse Genome and Its Role in Recurrent Chromosomal Translocations
Yu Zhang et al.
CELL (2012)
Circadian Oscillations of Protein-Coding and Regulatory RNAs in a Highly Dynamic Mammalian Liver Epigenome
Christopher Vollmers et al.
CELL METABOLISM (2012)
Revisiting higher-order and large-scale chromatin organization
Qian Bian et al.
CURRENT OPINION IN CELL BIOLOGY (2012)
Transcription factories: genetic programming in three dimensions
Lucas Brandon Edelman et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2012)
Circadian Dbp Transcription Relies on Highly Dynamic BMAL1-CLOCK Interaction with E Boxes and Requires the Proteasome
Markus Stratmann et al.
MOLECULAR CELL (2012)
Clocks, Metabolism, and the Epigenome
Dan Feng et al.
MOLECULAR CELL (2012)
Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β
Han Cho et al.
NATURE (2012)
The long-range interaction landscape of gene promoters
Amartya Sanyal et al.
NATURE (2012)
Topological domains in mammalian genomes identified by analysis of chromatin interactions
Jesse R. Dixon et al.
NATURE (2012)
Spatial partitioning of the regulatory landscape of the X-inactivation centre
Elphege P. Nora et al.
NATURE (2012)
NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy
Kim D. Pruitt et al.
NUCLEIC ACIDS RESEARCH (2012)
Coordination of the transcriptome and metabolome by the circadian clock
Kristin L. Eckel-Mahan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals
Nobuya Koike et al.
SCIENCE (2012)
Genome-Wide RNA Polymerase II Profiles and RNA Accumulation Reveal Kinetics of Transcription and Associated Epigenetic Changes During Diurnal Cycles
Gwendal Le Martelot et al.
PLOS BIOLOGY (2012)
MotifMap: integrative genome-wide maps of regulatory motif sites for model species
Kenneth Daily et al.
BMC BIOINFORMATICS (2011)
Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements
Ofir Hakim et al.
GENOME RESEARCH (2011)
On emerging nuclear order
Indika Rajapakse et al.
JOURNAL OF CELL BIOLOGY (2011)
Histone Lysine Demethylase JARID1a Activates CLOCK-BMAL1 and Influences the Circadian Clock
Luciano DiTacchio et al.
SCIENCE (2011)
Genome-Wide and Phase-Specific DNA-Binding Rhythms of BMAL1 Control Circadian Output Functions in Mouse Liver
Guillaume Rey et al.
PLOS BIOLOGY (2011)
Circadian Control of Global Gene Expression Patterns
Colleen J. Doherty et al.
ANNUAL REVIEW OF GENETICS, VOL 44 (2010)
PER2 Controls Lipid Metabolism by Direct Regulation of PPARγ
Benedetto Grimaldi et al.
CELL METABOLISM (2010)
3D shortcuts to gene regulation
Ofir Hakim et al.
CURRENT OPINION IN CELL BIOLOGY (2010)
The transcriptional interactome: gene expression in 3D
Stefan Schoenfelder et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2010)
JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets
Michael E. Hughes et al.
JOURNAL OF BIOLOGICAL RHYTHMS (2010)
Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells
Stefan Schoenfelder et al.
NATURE GENETICS (2010)
The histone methyltransferase MLL1 permits the oscillation of circadian gene expression
Sayako Katada et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
Elodie Portales-Casamar et al.
NUCLEIC ACIDS RESEARCH (2010)
Chromosome Territories
Thomas Cremer et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2010)
MotifMap: a human genome-wide map of candidate regulatory motif sites
Xiaohui Xie et al.
BIOINFORMATICS (2009)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information
Ruben Nogales-Cadenas et al.
NUCLEIC ACIDS RESEARCH (2009)
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
Erez Lieberman-Aiden et al.
SCIENCE (2009)
Genomic interactions: Chromatin loops and gene meeting points in transcriptional regulation
Tom Sexton et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2009)
The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control
Yasukazu Nakahata et al.
CELL (2008)
SIRT1 regulates circadian clock gene expression through PER2 deacetylation
Gad Asher et al.
CELL (2008)
CLOCK-mediated acetylation of BMAL1 controls circadian function
Jun Hirayama et al.
NATURE (2007)
Coordinate gene regulation during hematopoiesis is related to genomic organization
Steven T. Kosak et al.
PLOS BIOLOGY (2007)
Crosstalk between xenobiotics metabolism and circadian clock
Thierry Claudel et al.
FEBS LETTERS (2007)
The 4C technique:: the 'Rosetta stone' for genome biology in 3D?
Rolf Ohlsson et al.
CURRENT OPINION IN CELL BIOLOGY (2007)
Dynamic genome architecture in the nuclear space:: regulation of gene expression in three dimensions
Christian Lanctot et al.
NATURE REVIEWS GENETICS (2007)
GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists
Pedro Carmona-Saez et al.
GENOME BIOLOGY (2007)
Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions
Zhihu Zhao et al.
NATURE GENETICS (2006)
Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
Marieke Simonis et al.
NATURE GENETICS (2006)
The polycomb group protein EZH2 is required for mammalian circadian clock function
Jean-Pierre Etchegaray et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Folding and organization of a contiguous chromosome region according to the gene distribution pattern in primary genomic sequence
Lindsay S. Shopland et al.
JOURNAL OF CELL BIOLOGY (2006)
The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification
Federic Gachon et al.
CELL METABOLISM (2006)
CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1
JQ Ling et al.
SCIENCE (2006)
Rhythmic CLOCK-BMAL1 binding to multiple E-box motifs drives circadian Dbp transcription and chromatin transitions
JRA Ripperger et al.
NATURE GENETICS (2006)
System-level identification of transcriptional circuits underlying mammalian circadian clocks
HR Ueda et al.
NATURE GENETICS (2005)
Transcription regulation within the circadian clock: The E-box and beyond
PE Hardin
JOURNAL OF BIOLOGICAL RHYTHMS (2004)
Chromatin architecture of the human genome: Gene-rich domains are enriched in open chromatin fibers
N Gilbert et al.
CELL (2004)
Open source clustering software
MJL de Hoon et al.
BIOINFORMATICS (2004)
Rhythmic histone acetylation underlies transcription in the mammalian circadian clock
JP Etchegaray et al.
NATURE (2003)
TRANSFAC (R): transcriptional regulation, from patterns to profiles
V Matys et al.
NUCLEIC ACIDS RESEARCH (2003)
Gene density and transcription influence the localization of chromatin outside of chromosome territories detectable by FISH
NL Mahy et al.
JOURNAL OF CELL BIOLOGY (2002)
Coordination of circadian timing in mammals
SM Reppert et al.
NATURE (2002)
Phenotypic rescue of a peripheral clock genetic defect via SCN hierarchical dominance
MP Pando et al.
CELL (2002)
Coordinated transcription of key pathways in the mouse by the circadian clock
S Panda et al.
CELL (2002)
Mop3 is an essential component of the master circadian pacemaker in mammals
MK Bunger et al.
CELL (2000)
Resetting of circadian time peripheral tissues by glucocorticoid signaling
A Balsalobre et al.
SCIENCE (2000)
Share Paper
