4.7 Review

The impact of retrotransposons on human genome evolution

Journal

NATURE REVIEWS GENETICS
Volume 10, Issue 10, Pages 691-703

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/nrg2640

Keywords

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Funding

  1. Young Investigator ATIP Award from the Centre National de la Recherche Scientifique
  2. Louisiana Board of Regents Governor's Biotechnology Initiative [GBI 2002-005]
  3. National Science Foundation [BCS-0218338]
  4. National Institutes of Health [PO1 AG022064, RO1 GM59290]
  5. NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES [R01GM059290] Funding Source: NIH RePORTER
  6. NATIONAL INSTITUTE ON AGING [P01AG022064] Funding Source: NIH RePORTER

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Their ability to move within genomes gives transposable elements an intrinsic propensity to affect genome evolution. Non-long terminal repeat (LTR) retrotransposons - including LINE-1, Alu and SVA elements - have proliferated over the past 80 million years of primate evolution and now account for approximately one-third of the human genome. In this Review, we focus on this major class of elements and discuss the many ways that they affect the human genome: from generating insertion mutations and genomic instability to altering gene expression and contributing to genetic innovation. Increasingly detailed analyses of human and other primate genomes are revealing the scale and complexity of the past and current contributions of non-LTR retrotransposons to genomic change in the human lineage.

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