Related references
Note: Only part of the references are listed.NARWHAL, a primary analysis pipeline for NGS data
R. W. W. Brouwer et al.
BIOINFORMATICS (2012)
Spatial Organization of the Mouse Genome and Its Role in Recurrent Chromosomal Translocations
Yu Zhang et al.
CELL (2012)
Chromosome organization in the nucleus - charting new territory across the Hi-Cs
Josee Dostie et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2012)
Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythroid development
Ralph Stadhouders et al.
EMBO JOURNAL (2012)
HERC2 rs12913832 modulates human pigmentation by attenuating chromatin-loop formation between a long-range enhancer and the OCA2 promoter
Mijke Visser et al.
GENOME RESEARCH (2012)
FORUM: Genomics ENCODE explained
Joseph R. Ecker
NATURE (2012)
The long-range interaction landscape of gene promoters
Amartya Sanyal et al.
NATURE (2012)
Topological domains in mammalian genomes identified by analysis of chromatin interactions
Jesse R. Dixon et al.
NATURE (2012)
Spatial partitioning of the regulatory landscape of the X-inactivation centre
Elphege P. Nora et al.
NATURE (2012)
Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate
Yin C. Lin et al.
NATURE IMMUNOLOGY (2012)
Robust 4C-seq data analysis to screen for regulatory DNA interactions
Harmen J. G. van de Werken et al.
NATURE METHODS (2012)
Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip
Tom Sexton et al.
NATURE PROTOCOLS (2012)
Analysis of long-range chromatin interactions using Chromosome Conformation Capture
Natalia Naumova et al.
METHODS (2012)
Transcription regulation by distal enhancers Who's in the loop?
Ralph Stadhouders et al.
TRANSCRIPTION-AUSTIN (2012)
Functional and Mechanistic Diversity of Distal Transcription Enhancers
Michael Bulger et al.
CELL (2011)
The complex transcription regulatory landscape of our genome: control in three dimensions
Erik Splinter et al.
EMBO JOURNAL (2011)
The DNA-Binding Protein CTCF Limits Proximal Vκ Recombination and Restricts κ Enhancer Interactions to the Immunoglobulin κ Light Chain Locus
Claudia Ribeiro de Almeida et al.
IMMUNITY (2011)
Enhancer function: new insights into the regulation of tissue-specific gene expression
Chin-Tong Ong et al.
NATURE REVIEWS GENETICS (2011)
A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber
Itys Comet et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
Eric Soler et al.
GENES & DEVELOPMENT (2010)
An oestrogen-receptor-α-bound human chromatin interactome
Melissa J. Fullwood et al.
NATURE (2009)
Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
Erez Lieberman-Aiden et al.
SCIENCE (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Exchange of GATA factors mediates transitions in looped chromatin organization at a developmentally regulated gene locus
Huie Jing et al.
MOLECULAR CELL (2008)
High-resolution circular chromosome conformation capture assay
Anita Gondor et al.
NATURE PROTOCOLS (2008)
Quantitative analysis of chromosome conformation capture assays (3C-qPCR)
Helene Hagege et al.
NATURE PROTOCOLS (2007)
Mapping networks of physical interactions between genomic elements using 5C technology
Josee Dostie et al.
NATURE PROTOCOLS (2007)
Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
Marieke Simonis et al.
NATURE GENETICS (2006)
The three 'C's of chromosome conformation capture: controls, controls, controls
J Dekker
NATURE METHODS (2006)