4.7 Article

The big data challenges of connectomics

Journal

NATURE NEUROSCIENCE
Volume 17, Issue 11, Pages 1448-1454

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/nn.3837

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Funding

  1. US National Institute of Mental Health Silvio Conte Center [1P50MH094271]
  2. US National Institutes of Health [NS076467, 2R44MH088088-03]
  3. National Science Foundation [OIA-1125087, CCF-1217921, CCF-1301926, IIS-1447786, IIS-1447344]
  4. Department of Energy Advanced Scientific Computing Research grant [ER26116/DE-SC0008923]
  5. Nvidia
  6. Oracle
  7. Intel
  8. Div Of Information & Intelligent Systems
  9. Direct For Computer & Info Scie & Enginr [1447786] Funding Source: National Science Foundation
  10. Div Of Information & Intelligent Systems
  11. Direct For Computer & Info Scie & Enginr [1447344] Funding Source: National Science Foundation

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The structure of the nervous system is extraordinarily complicated because individual neurons are interconnected to hundreds or even thousands of other cells in networks that can extend over large volumes. Mapping such networks at the level of synaptic connections, a field called connectomics, began in the 1970s with a the study of the small nervous system of a worm and has recently garnered general interest thanks to technical and computational advances that automate the collection of electron-microscopy data and offer the possibility of mapping even large mammalian brains. However, modern connectomics produces 'big data', unprecedented quantities of digital information at unprecedented rates, and will require, as with genomics at the time, breakthrough algorithmic and computational solutions. Here we describe some of the key difficulties that may arise and provide suggestions for managing them.

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