4.8 Article

Proteomic and phosphoproteomic comparison of human ES and iPS cells

Related references

Note: Only part of the references are listed.
Article Biochemical Research Methods

COMPASS: A suite of pre- and post-search proteomics software tools for OMSSA

Craig D. Wenger et al.

PROTEOMICS (2011)

Article Biochemical Research Methods

Highly consistent, fully representative mRNA-Seq libraries from ten nanograms of total RNA

Srikumar Sengupta et al.

BIOTECHNIQUES (2010)

Article Cell & Tissue Engineering

Chromatin Structure and Gene Expression Programs of Human Embryonic and Induced Pluripotent Stem Cells

Matthew G. Guenther et al.

CELL STEM CELL (2010)

Article Cell & Tissue Engineering

Molecular Analyses of Human Induced Pluripotent Stem Cells and Embryonic Stem Cells

Mark H. Chin et al.

CELL STEM CELL (2010)

Article Biochemical Research Methods

Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation

Nagarjuna Nagaraj et al.

JOURNAL OF PROTEOME RESEARCH (2010)

Article Multidisciplinary Sciences

Epigenetic memory in induced pluripotent stem cells

K. Kim et al.

NATURE (2010)

Article Biotechnology & Applied Microbiology

Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells

Jose M. Polo et al.

NATURE BIOTECHNOLOGY (2010)

Article Biochemistry & Molecular Biology

DNA damage induces Chk1-dependent threonine-160 phosphorylation and activation of Cdk2

E. Bourke et al.

ONCOGENE (2010)

Article Multidisciplinary Sciences

Neural differentiation of human induced pluripotent stem cells follows developmental principles but with variable potency

Bao-Yang Hu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemical Research Methods

iTRAQ Underestimation in Simple and Complex Mixtures: The Good, the Bad and the Ugly

Saw Yen Ow et al.

JOURNAL OF PROTEOME RESEARCH (2009)

Article Biochemical Research Methods

Post-Acquisition ETD Spectral Processing for Increased Peptide Identifications

David M. Good et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2009)

Article Biochemical Research Methods

A Dual Pressure Linear Ion Trap Orbitrap Instrument with Very High Sequencing Speed

Jesper V. Olsen et al.

MOLECULAR & CELLULAR PROTEOMICS (2009)

Article Multidisciplinary Sciences

Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry

Danielle L. Swaney et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

Human Induced Pluripotent Stem Cells Free of Vector and Transgene Sequences

Junying Yu et al.

SCIENCE (2009)

Article Biochemical Research Methods

GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy

Yu Xue et al.

MOLECULAR & CELLULAR PROTEOMICS (2008)

Article Biochemical Research Methods

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Ali Mortazavi et al.

NATURE METHODS (2008)

Article Multidisciplinary Sciences

Induced pluripotent stem cell lines derived from human somatic cells

Junying Yu et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

Kazutoshi Takahashi et al.

Article Biochemical Research Methods

iTRAQ reagent-based quantitative proteomic analysis on a linear ion trap mass spectrometer

Timothy J. Griffin et al.

JOURNAL OF PROTEOME RESEARCH (2007)

Article Biochemical Research Methods

Higher-energy C-trap dissociation for peptide modification analysis

Jesper V. Olsen et al.

NATURE METHODS (2007)

Article Cell Biology

Establishment of histone gene regulation and cell cycle checkpoint control in human embryonic stem cells

Klaus A. Becker et al.

JOURNAL OF CELLULAR PHYSIOLOGY (2007)

Article Developmental Biology

Pitx2 promotes development of splanchnic mesoderm-derived branchiomeric muscle

Feiyan Dong et al.

DEVELOPMENT (2006)

Article Biochemistry & Molecular Biology

The RNA methyltransferase Misu (NSun2) mediates Myc-induced proliferation and is upregulated in tumors

Michaela Frye et al.

CURRENT BIOLOGY (2006)

Article Biotechnology & Applied Microbiology

Derivation of human embryonic stem cells in defined conditions

TE Ludwig et al.

NATURE BIOTECHNOLOGY (2006)

Article Biochemistry & Molecular Biology

CRMP-2 is involved in kinesin-1-dependent transport of the Sra-1/WAVE1 complex and axon formation

Y Kawano et al.

MOLECULAR AND CELLULAR BIOLOGY (2005)

Article Biotechnology & Applied Microbiology

i-Tracker:: For quantitative proteomics using iTRAQ™ -: art. no. 145

IP Shadforth et al.

BMC GENOMICS (2005)

Review Biochemical Research Methods

Interpretation of shotgun proteomic data - The protein inference problem

AI Nesvizhskii et al.

MOLECULAR & CELLULAR PROTEOMICS (2005)

Article Developmental Biology

The T-box transcription factor Tbx15 is required for skeletal development

MK Singh et al.

MECHANISMS OF DEVELOPMENT (2005)

Article Biochemical Research Methods

Open mass spectrometry search algorithm

LY Geer et al.

JOURNAL OF PROTEOME RESEARCH (2004)

Article Biochemical Research Methods

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

PL Ross et al.

MOLECULAR & CELLULAR PROTEOMICS (2004)

Article Biochemical Research Methods

The International Protein Index: An integrated database for proteomics experiments

PJ Kersey et al.

PROTEOMICS (2004)

Article Multidisciplinary Sciences

The protein kinase complement of the human genome

G Manning et al.

SCIENCE (2002)

Article Biochemistry & Molecular Biology

KEGG: Kyoto Encyclopedia of Genes and Genomes

M Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2000)