4.8 Article

Cost-effective strategies for completing the interactome

Related references

Note: Only part of the references are listed.
Review Biochemical Research Methods

Mass spectrometry-based functional proteomics: from molecular machines to protein networks

Thomas Kocher et al.

NATURE METHODS (2007)

Article Multidisciplinary Sciences

Analysis of Intraviral Protein-Protein Interactions of the SARS Coronavirus ORFeome

Albrecht von Brunn et al.

PLOS ONE (2007)

Article Biotechnology & Applied Microbiology

A proteome-wide protein interaction map for Campylobacter jejuni

Jodi R. Parrish et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

IntAct - open source resource for molecular interaction data

S. Kerrien et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Genetics & Heredity

Heritability and tissue specificity of expression quantitative trait loci

Enrico Petretto et al.

PLOS GENETICS (2006)

Review Biochemical Research Methods

Yeast two-hybrid contributions to interactome mapping

Jodi R. Parrish et al.

CURRENT OPINION IN BIOTECHNOLOGY (2006)

Article Biochemical Research Methods

Predicting interactions in protein networks by completing defective cliques

HY Yu et al.

BIOINFORMATICS (2006)

Article Multidisciplinary Sciences

Proteome survey reveals modularity of the yeast cell machinery

AC Gavin et al.

NATURE (2006)

Article Multidisciplinary Sciences

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

NJ Krogan et al.

NATURE (2006)

Article Multidisciplinary Sciences

Herpesviral protein networks and their interaction with the human proteome

P Uetz et al.

SCIENCE (2006)

Article Biotechnology & Applied Microbiology

A strategy for extracting and analyzing large-scale quantitative epistatic interaction data

Sean R. Collins et al.

GENOME BIOLOGY (2006)

Article Multidisciplinary Sciences

A protein interaction network of the malaria parasite Plasmodium falciparum

DJ LaCount et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

High-throughput two-hybrid analysis

S Fields

FEBS JOURNAL (2005)

Article Multidisciplinary Sciences

Towards a proteome-scale map of the human protein-protein interaction network

JF Rual et al.

NATURE (2005)

Review Biochemistry & Molecular Biology

Interactome: gateway into systems biology

ME Cusick et al.

HUMAN MOLECULAR GENETICS (2005)

Article Biochemistry & Molecular Biology

A human protein-protein interaction network:: A resource for annotating the proteome

U Stelzl et al.

Article Biochemistry & Molecular Biology

Genome-wide map of nucleosorne acetylation and methylation in yeast

DK Pokholok et al.

Article Biochemistry & Molecular Biology

Assessing the limits of genomic data integration for predicting protein networks

LJ Lu et al.

GENOME RESEARCH (2005)

Article Biochemical Research Methods

Kernel methods for predicting protein-protein interactions

A Ben-Hur et al.

BIOINFORMATICS (2005)

Article Multidisciplinary Sciences

Conserved patterns of protein interaction in multiple species

R Sharan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Multidisciplinary Sciences

A map of the interactome network of the metazoan C-elegans

SM Li et al.

SCIENCE (2004)

Article Multidisciplinary Sciences

Transcriptional regulatory code of a eukaryotic genome

CT Harbison et al.

NATURE (2004)

Article Multidisciplinary Sciences

A probabilistic functional network of yeast genes

I Lee et al.

SCIENCE (2004)

Article Biotechnology & Applied Microbiology

Unraveling protein interaction networks with near-optimal efficiency

M Lappe et al.

NATURE BIOTECHNOLOGY (2004)

Article Biotechnology & Applied Microbiology

A Drosophila protein-interaction map centered on cell-cycle regulators

CA Stanyon et al.

GENOME BIOLOGY (2004)

Article Multidisciplinary Sciences

A protein interaction map of Drosophila melanogaster

L Giot et al.

SCIENCE (2003)

Article Multidisciplinary Sciences

Genetics of gene expression surveyed in maize, mouse and man

EE Schadt et al.

NATURE (2003)

Article Biochemistry & Molecular Biology

STRING: a database of predicted functional associations between proteins

C von Mering et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Multidisciplinary Sciences

Comparative assessment of large-scale data sets of protein-protein interactions

C von Mering et al.

NATURE (2002)

Article Biochemical Research Methods

Protein interactions - Two methods for assessment of the reliability of high throughput observations

CM Deane et al.

MOLECULAR & CELLULAR PROTEOMICS (2002)

Article Multidisciplinary Sciences

Combined functional genomic maps of the C-elegans DNA damage response

SJ Boulton et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

Systematic genetic analysis with ordered arrays of yeast deletion mutants

AHY Tong et al.

SCIENCE (2001)

Article Biochemistry & Molecular Biology

Protein-protein interaction panel using mouse full-length cDNAs

H Suzuki et al.

GENOME RESEARCH (2001)

Article Multidisciplinary Sciences

A comprehensive two-hybrid analysis to explore the yeast protein interactome

T Ito et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Multidisciplinary Sciences

The protein-protein interaction map of Helicobacter pylori

JC Rain et al.

NATURE (2001)

Article Multidisciplinary Sciences

Genome-wide location and function of DNA binding proteins

B Ren et al.

SCIENCE (2000)

Review Multidisciplinary Sciences

The genome sequence of Drosophila melanogaster

MD Adams et al.

SCIENCE (2000)