4.8 Article

Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture

Journal

NATURE GENETICS
Volume 45, Issue 5, Pages 501-U69

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/ng.2606

Keywords

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Funding

  1. Aarno Koskelo Foundation
  2. Agency for Science, Technology and Research of Singapore
  3. Australian National Health and Medical Research Council
  4. Australian Research Council
  5. BDA Research
  6. BioSHaRE Consortium
  7. British Heart Foundation
  8. Cedars-Sinai Board of Governors' Chair in Medical Genetics
  9. Centre for Clinical Research at the University of Leipzig
  10. Centre of Excellence in Genomics
  11. University of Tartu
  12. Chief Scientist Office of the Scottish government
  13. City of Kuopio
  14. Social Insurance Institution of Finland
  15. Department of Educational Assistance
  16. University and Research of the Autonomous Province of Bolzano
  17. Donald W. Reynolds Foundation
  18. Dutch Ministry for Health, Welfare and Sports
  19. Dutch Ministry of Education, Culture and Science
  20. Dutch BBRMI-NL
  21. Dutch Brain Foundation
  22. Dutch Centre for Medical Systems Biology
  23. Dutch Diabetes Research Foundation
  24. Dutch Government Economic Structure-Enhancing Fund
  25. Dutch Inter-University Cardiology Institute
  26. Dutch Kidney Foundation
  27. Dutch Ministry of Economic Affairs
  28. Dutch Ministry of Justice
  29. Dutch Research Institute for Diseases in the Elderly
  30. Eleanor Nichols endowments
  31. Emil Aaltonen Foundation
  32. Erasmus Medical Center
  33. Erasmus University
  34. Estonian government
  35. European Commission
  36. European Regional Development Fund
  37. European Research Council
  38. European Science Foundation
  39. Faculty of Biology and Medicine of Lausanne
  40. Finland's Slot Machine Association
  41. Finnish Cultural Foundation
  42. Finnish Diabetes Research Foundation
  43. Finnish Foundation for Cardiovascular Research
  44. Finnish Funding Agency for Technology and Innovation
  45. Finnish Heart Association
  46. Finnish Medical Society
  47. Finnish Ministry of Education and Culture
  48. Finnish Ministry of Health and Social Affairs
  49. Finnish National Institute for Health and Welfare
  50. Finnish Social Insurance Institution
  51. Finska Lakaresallskapet
  52. Folkhalsan Research Foundation
  53. Foundation for Life and Health in Finland
  54. French Ministry of Research
  55. French National Research Agency
  56. Genetic Association Information Network
  57. German Diabetes Association
  58. German Federal Ministry of Education and Research
  59. German Ministry of Cultural Affairs
  60. German National Genome Research Network
  61. German Research Foundation
  62. GlaxoSmithKline
  63. Goteborg Medical Society
  64. Greek General Secretary of Research and Technology
  65. Gyllenberg Foundation
  66. Health Care Centers in Vasa, Narpes and Korsholm
  67. Heinz Nixdorf Foundation
  68. Helmholtz Zentrum Munchen-German Research Center for Environmental Health
  69. Icelandic Heart Association
  70. Icelandic Parliament
  71. Intramural Research Program of the Division of Cancer Epidemiology and Genetics, the National Cancer Institute, NIH
  72. Italian Ministry of Education, Universities and Research
  73. Italian Ministry of Health
  74. Juho Vainio Foundation
  75. Juvenile Diabetes Research Foundation International
  76. Knut and Alice Wallenberg Foundation
  77. Kuopio, Tampere and Turku University Hospital Medical Funds
  78. Leducq Foundation
  79. Lundberg Foundation
  80. March of Dimes
  81. Munich Center of Health Sciences as part of LMUinnovativ
  82. Municipal Health Care Center and Hospital in Jakobstad
  83. Municipality of Rotterdam
  84. Narpes Health Care Foundation
  85. National Alliance for Research on Schizophrenia and Depression Young Investigator Awards
  86. Netherlands Genomics Initiative
  87. Netherlands Organization for Health Research and Development
  88. UK NHSBT
  89. US National Institutes of Health
  90. Nordic Center of Cardiovascular Research
  91. Nordic Center of Excellence in Disease Genetics
  92. Nordic Centre of Excellence on Systems Biology in Controlled Dietary Interventions and Cohort Studies
  93. Northern Netherlands Collaboration of Provinces
  94. Novo Nordisk Foundation
  95. Ollqvist Foundation
  96. Orion-Farmos Research Foundation
  97. Paavo Nurmi Foundation
  98. Paivikki and Sakari Sohlberg Foundation
  99. Perklen Foundation
  100. Petrus and Augusta Hedlunds Foundation
  101. Province of Groningen
  102. Republic of Croatia Ministry of Science, Education and Sport
  103. Reynold's Foundation
  104. Royal Society
  105. Samfundet Folkhalsan
  106. Signe and Ane Gyllenberg Foundation
  107. Sigrid Juselius Foundation
  108. Social Ministry of the Federal State of Mecklenburg-West Pomerania
  109. Sophia Foundation for Medical Research
  110. South Tyrolean Sparkasse Foundation
  111. Southern California Diabetes Endocrinology Research Center
  112. Stockholm County Council
  113. Strategic Cardiovascular Program of Karolinska Institutet
  114. Strategic Support for Epidemiological Research at Karolinska Institutet
  115. Susan G. Komen Breast Cancer Foundation
  116. Swedish Ministry for Higher Education
  117. Swedish Cancer Society
  118. Swedish Cultural Foundation in Finland
  119. Swedish Diabetes Association
  120. Swedish Foundation for Strategic Research
  121. Swedish Heart-Lung Foundation
  122. Swedish Medical Research Council
  123. Swedish Ministry of Education
  124. Swedish Research Council
  125. Swedish Royal Academy of Science
  126. Swedish Society for Medical Research
  127. Swedish Society of Medicine
  128. Swiss National Science Foundation
  129. Tampere Tuberculosis Foundation
  130. Great Wine Estates of the Margaret River Region of Western Australia
  131. Paul Michael Donovan Charitable Foundation
  132. Torsten and Ragnar Soderberg Foundation
  133. Cancer Research UK
  134. UK Diabetes Association
  135. UK Heart Foundation
  136. UK MRCUK NIHR, Biomedical Research Centre
  137. UK West Anglia Primary and Community Care
  138. University Medical Center Groningen
  139. University of Groningen
  140. Vastra Gotaland Foundation
  141. VU University: the Institute for Health and Care Research and the Neuroscience Campus Amsterdam
  142. Wellcome Trust
  143. Yrjo Jahnsson Foundation
  144. Cancer Research UK [14136] Funding Source: researchfish
  145. Chief Scientist Office [CZB/4/710] Funding Source: researchfish
  146. Economic and Social Research Council [ES/J023299/1, ES/G007438/1] Funding Source: researchfish
  147. Medical Research Council [MC_UU_12015/2, MC_U105260558, MC_U123092720, MR/K006584/1, G1000143, G0401527, G0601261, MC_UU_12015/1, MC_U106179472, G1002084, G0600237, G0801056B, MC_U106188470, MC_PC_U127561128, MR/K013351/1, G9521010, MC_U106179471] Funding Source: researchfish
  148. National Institute for Health Research [RP-PG-0310-1002, NF-SI-0611-10099, NF-SI-0512-10113] Funding Source: researchfish
  149. Novo Nordisk Fonden [NNF13OC0005785] Funding Source: researchfish
  150. ESRC [ES/J023299/1, ES/G007438/1] Funding Source: UKRI
  151. MRC [MC_UU_12015/1, MR/K013351/1, G9521010, MC_U105260558, G1002084, MC_U106188470, MC_U106179472, MC_U123092720, G0601261, G0600237, MC_UU_12015/2, MC_PC_U127561128] Funding Source: UKRI

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Approaches exploiting trait distribution extremes may be used to identify loci associated with common traits, but it is unknown whether these loci are generalizable to the broader population. In a genome-wide search for loci associated with the upper versus the lower 5th percentiles of body mass index, height and waist-to-hip ratio, as well as clinical classes of obesity, including up to 263,407 individuals of European ancestry, we identified 4 new loci (IGFBP4, H6PD, RSRC1 and PPP2R2A) influencing height detected in the distribution tails and 7 new loci (HNF4G, RPTOR, GNAT2, MRPS33P4, ADCY9, HS6ST3 and ZZZ3) for clinical classes of obesity. Further, we find a large overlap in genetic structure and the distribution of variants between traits based on extremes and the general population and little etiological heterogeneity between obesity subgroups.

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