4.8 Article

Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma

Journal

NATURE GENETICS
Volume 44, Issue 1, Pages 17-19

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/ng.1014

Keywords

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Funding

  1. National Basic Research Program of China (973 program) [2011CB809200]
  2. National Natural Science Foundation of China [30725008, 30890032, 30811130531]
  3. Chinese 863 program [2006AA02A301, 2006AA02A302, 2009AA022707]
  4. Shenzhen Municipal Government of China [JC200903190767A, JC200903190772A, ZYC200903240076A, CXB200903110066A, ZYC200903240077A, ZYC200903240080A]
  5. Promotion Program for Shenzhen Key Laboratory, Shenzhen, China [CXB200903090055A, CXB201005250016A]
  6. Biobank of Complex Diseases in Shenzhen [CXC201005260001A]
  7. Shenzhen municipal government
  8. local government of the Yantian District of Shenzhen

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We sequenced whole exomes of ten clear cell renal cell carcinomas (ccRCCs) and performed a screen of similar to 1,100 genes in 88 additional ccRCCs, from which we discovered 12 previously unidentified genes mutated at elevated frequencies in ccRCC. Notably, we detected frequent mutations in the ubiquitin-mediated proteolysis pathway (UMPP), and alterations in the UMPP were significantly associated with overexpression of HIF1 alpha and HIF2 alpha in the tumors (P = 0.01 and 0.04, respectively). Our findings highlight the potential contribution of UMPP to ccRCC tumorigenesis through the activation of the hypoxia regulatory network.

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