4.8 Article

A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1

Journal

NATURE GENETICS
Volume 42, Issue 11, Pages 985-U106

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/ng.694

Keywords

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Funding

  1. Wellcome Trust [083948/Z/07/Z]
  2. Netherlands Organization for Health Research and Development (P.L.J.M.Z.)
  3. Swedish Medical Research Council
  4. Karolinska Institutet
  5. Karolinska University Hospital
  6. Psoriasis Foundation
  7. AFA Insurance and Welander Finsen Foundation
  8. Association for the Defence of Psoriasis Patients
  9. Psoriasis Association and the Cecil King Memorial Foundation
  10. Swedish Psoriasis Association
  11. German Research Foundation [Tr 228/5-4, Re 679/104]
  12. Interdisciplinary Centre for Clinical Research of the University of Erlangen-Nuremberg [IZKF B32/A8]
  13. Spanish Ministry of Science and Innovation [SAF 2008-00357]
  14. Departments of Health and Universities and Innovation
  15. Genetic Repository in Ireland for Psoriasis and Psoriatic Arthritis
  16. Irish Health Research Board
  17. Wellcome Trust and Science Foundation Ireland [078173/Z/05/Z, 068545/Z/02]
  18. National Institute for Health Research
  19. Manchester Biomedical Research Centre
  20. Arthritis Research UK [17552]
  21. Wolfson-Royal Society
  22. Generation Trust
  23. UK Medical Research Council [G0601387]
  24. Department of Health through the National Institute for Health Research (NIHR)
  25. St. Thomas' National Health Service (NHS) Foundation Trust
  26. King's College London
  27. Medical Research Council [G0000934]
  28. Wellcome Trust [083948/Z/07/Z, 078173/Z/05/Z] Funding Source: Wellcome Trust
  29. MRC [G0901310, G19/2, G0000934, G0600705, G0700314, G0601387, G0800582] Funding Source: UKRI
  30. Medical Research Council [G0901310, G0800582, G0600705, G19/2, G9817803B, G0700314, G0601387, G0600698B, G0000934] Funding Source: researchfish
  31. National Institute for Health Research [CL-2008-06-002, NF-SI-0507-10379, PDA/02/06/016] Funding Source: researchfish

Ask authors/readers for more resources

To identify new susceptibility loci for psoriasis, we undertook a genome-wide association study of 594,224 SNPs in 2,622 individuals with psoriasis and 5,667 controls. We identified associations at eight previously unreported genomic loci. Seven loci harbored genes with recognized immune functions (IL28RA, REL, IFIH1, ERAP1, TRAF3IP2, NFKBIA and TYK2). These associations were replicated in 9,079 European samples (six loci with a combined P < 5 x 10(-8) and two loci with a combined P < 5 x 10(-7)). We also report compelling evidence for an interaction between the HLA-C and ERAP1 loci (combined P = 6.95 x 10(-6)). ERAP1 plays an important role in MHC class I peptide processing. ERAP1 variants only influenced psoriasis susceptibility in individuals carrying the HLA-C risk allele. Our findings implicate pathways that integrate epidermal barrier dysfunction with innate and adaptive immune dysregulation in psoriasis pathogenesis.

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