4.8 Article

Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution

Journal

NATURE GENETICS
Volume 42, Issue 11, Pages 949-U160

Publisher

NATURE PUBLISHING GROUP
DOI: 10.1038/ng.685

Keywords

-

Funding

  1. Academy of Finland [104781, 120315, 129269, 117797, 121584, 126925, 129418, 129568, 77299, 124243, 129680, 129494, 10404, 213506, 114382, 126775, 127437, 129255, 129306, 130326, 209072, 210595, 213225, 216374]
  2. ADA [N02-HL-6-4278]
  3. ALF/LUA Gothenburg
  4. Althingi (the Icelandic Parliament)
  5. Amgen
  6. Augustinus Foundation
  7. Becket Foundation
  8. Biocentrum Helsinki
  9. Biomedicum Helsinki Foundation
  10. Boston Obesity Nutrition Research Center [DK46200]
  11. British Diabetes Association [1192]
  12. British Diabetic Association Research
  13. British Heart Foundation [97020, PG/02/128]
  14. Busselton Population Medical Research Foundation
  15. Cambridge NIHR Comprehensive Biomedical Research Centre
  16. CamStrad
  17. Chief Scientist Office of the Scottish Government
  18. Contrat Plan Etat Region de France
  19. Danish Centre for Health Technology Assessment
  20. Danish Diabetes Association
  21. Danish Ministry of Internal Affairs and Health
  22. Danish Heart Foundation
  23. Danish Pharmaceutical Association
  24. Danish Research Council
  25. DIAB Core (German Network of Diabetes)
  26. Diabetes UK
  27. Donald W. Reynolds Foundation
  28. Dresden University of Technology
  29. Med Drive
  30. EMGO+ institute
  31. Emil and Vera Cornell Foundation
  32. Erasmus Medical Center and Erasmus University, Rotterdam, The Netherlands
  33. Estonian Government [SF0180142s08]
  34. European Commission [2004310, 212111, 205419, 245536, DG XII, HEALTH-F4-2007-201413, FP7/2007-2013, QLG1-CT-2000-01643, QLG2-CT-2002-01254, LSHG-CT-2006-018947, LSHG-CT-2006-01947, LSHG-CT-2004-512066, LSHM-CT-2007-037273, EU/WLRT-2001-01254, LSHG-CT-2004-518153, SOC 95201408 05F02]
  35. Federal Ministry of Education and Research, Germany [01ZZ9603, 01ZZ0103, 01ZZ0403, 03ZIK012, 01 EA 9401]
  36. Federal State of Mecklenburg-West Pomerania
  37. Finnish Diabetes Research Foundation
  38. Finnish Diabetes Research Society
  39. Finnish Foundation for Pediatric Research
  40. Finnish Foundation of Cardiovascular Research
  41. Finnish Medical Society
  42. Finska Lakaresallskapet
  43. Finnish Ministry of Education
  44. Folkhalsan Research Foundation
  45. Fond Europeen pour le Developpement Regional
  46. Fondation LeDucq
  47. Foundation for Life and Health in Finland
  48. GEN-AU 'GOLD' from Austria
  49. German Bundesministerium fuer Forschung und Technology [01 AK 803 A-H, 01 IG 07015 G]
  50. German National Genome Research Net NGFN2 and NGFNplus [01GS0823, FKZ 01GS0823]
  51. German Research Council [KFO-152]
  52. GlaxoSmithKline
  53. Goteborg Medical Society
  54. Gyllenberg Foundation
  55. Health Care Center in Vasa
  56. Healthway, Western Australia
  57. Helmholtz Center Munich
  58. Helsinki University Central Hospital
  59. Hjartavernd (the Icelandic Heart Association)
  60. Ib Henriksen Foundation
  61. IZKF [B27]
  62. Jalmari and Rauha Ahokas Foundation
  63. Juho Vainio Foundation
  64. Juvenile Diabetes Research Foundation International (JDRF)
  65. Karolinska Institute and the Stockholm County Council [560183]
  66. Knut and Alice Wallenberg Foundation
  67. Lundbeck Foundation Centre of Applied Medical Genomics
  68. Knut Krohn, Microarray Core Facility of the Interdisciplinary Centre for Clinical Research (IZKF), University of Leipzig, Germany
  69. MC Health
  70. Ministry of Cultural Affairs of the Federal State of Mecklenburg-West Pomerania, Germany
  71. South Tyrol Ministry of Health
  72. Ministry of Science, Education and Sport of the Republic of Croatia [216-1080315-0302]
  73. Medical Research Council UK [G0000649, G0601261, G9521010D, G0000934, G0500539, G0600331]
  74. Montreal Heart Institute Foundation
  75. MRC Centre for Obesity-Related Metabolic Disease
  76. Municipal Health Care Center and Hospital in Jakobstad
  77. Municipality of Rotterdam
  78. Narpes Health Care Foundation
  79. National Health and Medical Research Council of Australia and the Great Wine Estates Auctions
  80. Netherlands Centre for Medical Systems Biology [SPI 56-464-1419]
  81. Netherlands Ministry for Health
  82. Welfare and Sports
  83. Netherlands Ministry of Education, Culture and Science
  84. Netherlands Genomics Initiative
  85. Netherlands Consortium [050-060-810]
  86. Netherlands Organisation of Scientific Research Netherlandse Organisatie voor Wetenschappelijk Onderzoek (NWO) Investments [175.010.2005.011, 911-03-012, 904-61-090, 904-61-193, 480-04-004, 400-05-717]
  87. National Institute on Aging
  88. US National Institutes of Health [CA047988, CA65725, CA87969, CA49449, CA67262, CA50385, DK075787, DK062370, DK58845, DK072193, K23-DK080145, K99HL094535, N01-HC85079, N01-HC85086, N01-HG-65403, N01-AG-12100, N01-HC-25195, N01-HC35129, N01-HC15103, N01-HC55222, N01-HC75150, N01-HC45133, N01-HC55015, N01-HC55016, N01-HC-55018, N01-HC-55019, N01-HC-55020, N01-HC-55021, N01-HC-55022, N01-AG-1-2109, HL71981, HG005581, HG002651, HL084729, HL043851, HHSN268200625226C, MH084698, P30-DK072488, R01 HL087652, R01-HL087641, R01-HL59367, R01-HL086694, R01-HL087647, R01-HL087679, R01-HL087700, R01-AG031890, R01-HL088119, R01-DK068336, R01-DK075681, R01-DK-073490, R01-DK075787, R01-MH63706, U01-HL72515, U01-GM074518, U01-HL084756, U01-HG004399, UO1-CA098233, UL1-RR025005, U01-HG004402, U01-DK062418, U01 HL080295, T32-HG00040, 263-MA-410953, 1RL1-MH083268-01, 1Z01-HG000024]
  89. National Institute for Health Research (NIHR)
  90. Neuroscience Campus Amsterdam
  91. Novo Nordisk Foundation
  92. Novo Nordisk Inc.
  93. Ollqvist Foundation
  94. Paavo Nurmi Foundation
  95. Paivikki and Sakari Sohlberg Foundation
  96. Pew Scholarship for the Biomedical Sciences
  97. Perklen Foundation
  98. Petrus and Augusta Hedlunds Foundation
  99. Research Institute for Diseases in the Elderly [014-93-015]
  100. Sahlgrenska Center for Cardiovascular and Metabolic Research (CMR) [A305:188]
  101. Siemens Healthcare, Erlangen, Germany
  102. Signe and Ane Gyllenberg Foundation
  103. Sigrid Juselius Foundation
  104. Social Insurance Institution of Finland
  105. Social Ministry of the Federal State of Mecklenburg-West Pomerania, Germany
  106. South Tyrolean Sparkasse Foundation
  107. State of Bavaria, Germany
  108. Support for Science Funding programme
  109. Swedish Cultural Foundation in Finland
  110. Swedish Foundation for Strategic Research (SSF)
  111. Swedish Medical Research Council [8691, K2007-66X-20270-01-3, K2010-54X-09894-19-3]
  112. Swedish Society of Medicine
  113. Swiss National Science Foundation [33CSCO-122661]
  114. Royal Society
  115. Royal Swedish Academy of Science
  116. Torsten and Ragnar Soderberg's Foundation
  117. Turku University Hospitals
  118. UK Department of Health Policy Research Programme
  119. University and Research of the Autonomous Province of Bolzano
  120. University Hospital Medical
  121. University Hospital Oulu, Biocenter, University of Oulu, Finland [75617]
  122. Vastra Gotaland Foundation
  123. Wellcome Trust [077016/Z/05/Z, 068545/Z/02, 072960, 076113, 083270, 085301, 079557, 081682, 075491, 076113/B/04/Z, 091746/Z/10/Z, 079895, WT086596/Z/08/Z]
  124. Western Australian Genetic Epidemiology Resource
  125. Western Australian DNA Bank (both National Health and Medical Research Council of Australia Enabling Facilities)
  126. Yrjo Jahnsson Foundation
  127. AstraZeneca AB
  128. Lundberg Foundation
  129. Swedish Heart-Lung Foundation
  130. Research Foundation of Copenhagen County
  131. Health care center in Nerpes
  132. Health care center in Korsholm
  133. Chief Scientist Office [CZB/4/710] Funding Source: researchfish
  134. Medical Research Council [G0501184, G0801056B, G0000934, G0600331, MC_U106188470, G0500115, MC_U127561128, G0601261, G0600705, MC_UP_A390_1107, G0401527, MC_qA137934, MC_U106179472, G0801056] Funding Source: researchfish
  135. National Institute for Health Research [NF-SI-0508-10212] Funding Source: researchfish
  136. MRC [G0801056, MC_U127561128, MC_UP_A390_1107, MC_U106188470, MC_U106179472, G0600331, G0601261, G0000934, G0600705, G0500115, G0501184, MC_qA137934] Funding Source: UKRI
  137. Academy of Finland (AKA) [114382, 129568, 210595, 129418, 216374, 213225, 129418, 216374, 114382, 213225, 129568, 210595] Funding Source: Academy of Finland (AKA)

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Waist-hip ratio (WHR) is a measure of body fat distribution and a predictor of metabolic consequences independent of overall adiposity. WHR is heritable, but few genetic variants influencing this trait have been identified. We conducted a meta-analysis of 32 genome-wide association studies for WHR adjusted for body mass index (comprising up to 77,167 participants), following up 16 loci in an additional 29 studies (comprising up to 113,636 subjects). We identified 13 new loci in or near RSPO3, VEGFA, TBX15-WARS2, NFE2L3, GRB14, DNM3-PIGC, ITPR2-SSPN, LY86, HOXC13, ADAMTS9, ZNRF3-KREMEN1, NISCH-STAB1 and CPEB4 (P = 1.9 x 10(-9) to P = 1.8 x 10(-40)) and the known signal at LYPLAL1. Seven of these loci exhibited marked sexual dimorphism, all with a stronger effect on WHR in women than men (P for sex difference = 1.9 x 10(-3) to P = 1.2 x 10(-13)). These findings provide evidence for multiple loci that modulate body fat distribution independent of overall adiposity and reveal strong gene-by-sex interactions.

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