4.8 Article

Alterations of the human gut microbiome in liver cirrhosis

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Richness of human gut microbiome correlates with metabolic markers

Emmanuelle Le Chatelier et al.

NATURE (2013)

Article Multidisciplinary Sciences

Dietary intervention impact on gut microbial gene richness

Aurelie Cotillard et al.

NATURE (2013)

Article Biotechnology & Applied Microbiology

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

Mads Albertsen et al.

NATURE BIOTECHNOLOGY (2013)

Article Gastroenterology & Hepatology

Spontaneous bacterial peritonitis: recent guidelines and beyond

R. Wiest et al.

Editorial Material Gastroenterology & Hepatology

Gut microbiome and intestinal barrier failure - The Achilles heel in hepatology?

Daniel Benten et al.

JOURNAL OF HEPATOLOGY (2012)

Article Gastroenterology & Hepatology

Bacterial translocation and changes in the intestinal microbiome in mouse models of liver disease

Derrick E. Fouts et al.

JOURNAL OF HEPATOLOGY (2012)

Article Multidisciplinary Sciences

A framework for human microbiome research

Barbara A. Methe et al.

NATURE (2012)

Article Multidisciplinary Sciences

A metagenome-wide association study of gut microbiota in type 2 diabetes

Junjie Qin et al.

NATURE (2012)

Article Multidisciplinary Sciences

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower et al.

NATURE (2012)

Article Biochemistry & Molecular Biology

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

Ioanna Pagani et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges

Sean Powell et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease

Sharon Greenblum et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Symptomatic atherosclerosis is associated with an altered gut metagenome

Fredrik H. Karlsson et al.

NATURE COMMUNICATIONS (2012)

Article Biochemical Research Methods

Microbial Co-occurrence Relationships in the Human Microbiome

Karoline Faust et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Review Gastroenterology & Hepatology

Gut microbiota and probiotics in chronic liver diseases

Claudia Cesaro et al.

DIGESTIVE AND LIVER DISEASE (2011)

Article Gastroenterology & Hepatology

Twin Study Indicates Loss of Interaction Between Microbiota and Mucosa of Patients With Ulcerative Colitis

Patricia Lepage et al.

GASTROENTEROLOGY (2011)

Article Gastroenterology & Hepatology

Enteric Dysbiosis Associated with a Mouse Model of Alcoholic Liver Disease

Arthur W. Yan et al.

HEPATOLOGY (2011)

Article Gastroenterology & Hepatology

Characterization of Fecal Microbial Communities in Patients with Liver Cirrhosis

Yanfei Chen et al.

HEPATOLOGY (2011)

Article Multidisciplinary Sciences

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

Gary D. Wu et al.

SCIENCE (2011)

Article Biochemistry & Molecular Biology

De novo assembly of human genomes with massively parallel short read sequencing

Ruiqiang Li et al.

GENOME RESEARCH (2010)

Review Gastroenterology & Hepatology

The Role of Intestinal Endotoxin in Liver Injury: A Long and Evolving History

James P. Nolan

HEPATOLOGY (2010)

Article Multidisciplinary Sciences

A human gut microbial gene catalogue established by metagenomic sequencing

Junjie Qin et al.

NATURE (2010)

Article Medicine, General & Internal

Rifaximin Treatment in Hepatic Encephalopathy

Nathan M. Bass et al.

NEW ENGLAND JOURNAL OF MEDICINE (2010)

Article Multidisciplinary Sciences

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

Carlotta De Filippo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Metabolic Syndrome and Altered Gut Microbiota in Mice Lacking Toll-Like Receptor 5

Matam Vijay-Kumar et al.

SCIENCE (2010)

Article Multidisciplinary Sciences

A Catalog of Reference Genomes from the Human Microbiome

Karen E. Nelson et al.

SCIENCE (2010)

Article Mathematical & Computational Biology

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

Tsute Chen et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2010)

Article Biochemical Research Methods

SOAP2: an improved ultrafast tool for short read alignment

Ruiqiang Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Review Microbiology

Effect of bile salts on the DNA and membrane integrity of enteric bacteria

Megan E. Merritt et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2009)

Article Multidisciplinary Sciences

A core gut microbiome in obese and lean twins

Peter J. Turnbaugh et al.

NATURE (2009)

Article Multidisciplinary Sciences

Symbiotic gut microbes modulate human metabolic phenotypes

Min Li et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Microbial ecology - Human gut microbes associated with obesity

Ruth E. Ley et al.

NATURE (2006)

Article Multidisciplinary Sciences

An obesity-associated gut microbiome with increased capacity for energy harvest

Peter J. Turnbaugh et al.

NATURE (2006)

Article Biochemistry & Molecular Biology

MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

Hideki Noguchi et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Genetics & Heredity

Principal components analysis corrects for stratification in genome-wide association studies

Alkes L. Price et al.

NATURE GENETICS (2006)

Article Multidisciplinary Sciences

Metagenomic analysis of the human distal gut microbiome

Steven R. Gill et al.

SCIENCE (2006)

Article Multidisciplinary Sciences

Obesity alters gut microbial ecology

RE Ley et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Review Gastroenterology & Hepatology

Bacterial translocation (BT) in cirrhosis

R Wiest et al.

HEPATOLOGY (2005)

Review Gastroenterology & Hepatology

Gut microflora in the pathogenesis of the complications of cirrhosis

G Garcia-Tsao

BEST PRACTICE & RESEARCH CLINICAL GASTROENTEROLOGY (2004)

Review Biotechnology & Applied Microbiology

Probiotic bacteria:: safety, functional and technological properties

M Saarela et al.

JOURNAL OF BIOTECHNOLOGY (2000)